KEGG   Trachemys scripta elegans (red-eared slider): 117868981
Entry
117868981         CDS       T07347                                 
Symbol
WDR18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tst03009]
    117868981 (WDR18)
Ribosome biogenesis [BR:tst03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    117868981 (WDR18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_VPS8 WDR54 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_IP5PC_F Beta-prop_DCAF12 Ge1_WD40
Other DBs
NCBI-GeneID: 117868981
NCBI-ProteinID: XP_034611313
LinkDB
Position
22:complement(5253596..5278027)
AA seq 432 aa
MAAPMEVALVTDAAGPLSNCSVWELHSGSALPGYRGGNSGARGLALLGGEHLLGAQLGKG
YINVWELQRKDQLQQKIICPGLVTCLTASPNGLYILAGIAESIYLWEVSSGNLLAILNRH
YQDLTCLCFTDDSSHFLSGGKDCLVLVWNLYSTLQVEHSQIPEPRHVWSRHSLPITDLCC
GFGGPLARAATASLDQTVKLWEISSGELLLSVLFDVGIMAVTLDLSEYHMFCGGMDGSIF
QVDLCAWPVQRDRAFHSERENGKIFRGHRNQVTCLSVSTDGSLLLSGSHDETVRLWDIQS
KQCLRTVNHKGPVTNAFITLAPANMFNPDSKPGVPLPKFSKHLHGTESSEDQGAEGVTLR
LGLHQPGAGESYLEKAERLYSQMCSTREKNLMGDQEQLKIQVTELEDEVSTLRKINKNLF
DFSARIITKTAK
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcggcgcccatggaggtggcgctggtgacggacgccgccgggccgctgagcaattgc
tcggtgtgggagctgcactcgggctccgcgctccccggctaccggggcggcaacagcggg
gcgcggggcctggcgctgctgggcggggagcacctgctgggggcgcagctgggcaagggc
tacatcaacgtgtgggagctgcagagaaaggaccaactccagcagaagatcatctgccct
gggctggtgacctgcctgacagcttcccctaatggtctctacatcctggcaggcattgct
gagagcatctatctgtgggaggtctccagtgggaacctcctcgccatcctgaaccgacac
taccaagacctcacgtgtctctgctttaccgacgacagcagtcactttctctcagggggc
aaggactgcctggtcctggtgtggaacctttacagcaccctgcaggtggagcactcccag
atcccggagccccgccacgtgtggtctcgacacagcctgcccataacagacctgtgctgc
ggcttcggaggccccctggcgcgagcggccaccgcctccctcgaccagacggtgaagctc
tgggaaatctcctctggagagctcctgctctctgtcctcttcgatgtgggcatcatggcg
gtgacccttgacctctccgagtatcacatgttctgtggcggcatggacggctccatcttt
caggtcgacctctgtgcctggcctgttcagagagaccgagccttccactcggagcgggag
aacgggaagatcttcagggggcacaggaaccaggtgacctgtctgtccgtctccacagac
ggcagcctgctgctctccggctcgcatgacgaaacagtccggctatgggacatccagagc
aagcagtgcctgcggacggtgaatcacaaaggcccagtgacaaacgccttcatcacgctg
gccccagccaacatgtttaacccagacagcaagcccggcgtgcctctgcccaaattcagc
aaacacctgcacgggaccgagagcagcgaggatcaaggagccgagggggtgacgctgcgc
ctcggcctccaccagccgggggctggggagagctacttggaaaaggctgaacggttgtac
tcgcagatgtgctcgacgagggaaaagaacctgatgggagaccaggagcagctgaagatc
caagtgactgaactggaggatgaagtcagcacgctccggaagatcaataagaacctcttt
gacttctctgcccgcatcatcactaagacagccaagtga

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