Trachemys scripta elegans (red-eared slider): 117868987
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Entry
117868987 CDS
T07347
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117868987 (DDX49)
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117868987 (DDX49)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
90S particles
Helicases
117868987 (DDX49)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
P-loop_SecA
Cas3-like_C_2
WHD
Motif
Other DBs
NCBI-GeneID:
117868987
NCBI-ProteinID:
XP_034611324
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All DBs
Position
22:2148961..2156538
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AA seq
369 aa
AA seq
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MVAQALELSRKPHVVIATPGRLADHLRSSNTFSLRKIKFLVLDEADRLLEQGCTDFTKDL
EVILGAVPATRQTLLFSATLTDTLNELKSLAMNKPFFWESQAEVRTVDELVQRYLLVPEK
VKDAYLVHLIQTFQDEHEDWSIIIFTSTCKNCQILNMMLKKFNFPSVALHSMMKQKQRFA
ALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRHGLAI
TLVTQYDIHLVHAIEEQIKTKLQEFSVEERAVLSILTQVNVARRECEIKLEATDFDEKKE
INKRKQMILEGKDPDVEAKRKAELAKIKRKNKQFRERVQQTLQEKKQLRLKRKLQKKARR
QQRRVAEEK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtggcccaggctctggaactctcccgtaagcctcatgttgtcattgccacgcctggc
cggctggctgatcatctccgcagctccaacaccttcagcctcagaaagataaagttcctg
gttttggacgaagctgaccgactgctggaacagggctgtactgacttcaccaaggacctg
gaggtgattctgggggctgttccagcaaccaggcagacgctgctctttagtgctacgctg
acagacacgctgaacgagctgaagagcctcgccatgaacaaacccttcttctgggagtct
caggccgaagtgcggaccgtggacgagctggttcagcgctacctgctcgtgccggagaaa
gtcaaggacgcgtacctcgtccatttaatccagaccttccaggatgagcacgaggactgg
tccatcatcatcttcaccagcacctgcaagaactgccagatcttgaatatgatgctgaag
aagttcaacttcccatcagtggctttgcattccatgatgaagcagaagcagcgctttgca
gccttagcaaaattcaagtccagcgtctttaagatcctcatcgccactgacgtggctgcc
aggggcttagacattccaacagtccaagttgtcatcaaccacaacaccccaggcctgccg
aaaatctacatccaccgggtaggccggacggcccgtgcaggccggcacggactcgccatc
acgctggtgacgcagtacgacatccacctggtgcatgccattgaggagcagatcaaaacg
aagctgcaggagttctcggtggaggagcgtgcggtactcagcatcctcacccaggtgaac
gtcgccaggagggagtgtgaaatcaaactggaggcgactgattttgatgagaagaaggaa
ataaataagcggaagcaaatgatcctggaaggaaaggacccggacgtggaggcaaagagg
aaagcggagctggccaagattaagaggaagaacaagcagttccgtgaaagggtccagcag
acgctgcaggagaagaaacagcttcggctgaagaggaagctgcagaagaaggcgcgtcgg
cagcagagacgggtggccgaggagaagtga
DBGET
integrated database retrieval system
