Trachemys scripta elegans (red-eared slider): 117868998
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Entry
117868998 CDS
T07347
Symbol
LINGO3
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117868998 (LINGO3)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117868998 (LINGO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_14
ig
Ig_2
LRR_RPS2
V-set
LRRNT
LRR_LRWD1
LRRCT
LRR_9
Motif
Other DBs
NCBI-GeneID:
117868998
NCBI-ProteinID:
XP_034611338
LinkDB
All DBs
Position
22:10250641..10367431
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AA seq
605 aa
AA seq
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MLYTMTCWLPVLGLHWILLSTAPVEACPARCECAPQIKSVVCHRKRLTSIPEGIPTETKV
LELSKNRIRCLNPGDLSPYPLLEELDLSENIIVSVEPGAFSNLFHLQILRLRGNQLKLIP
SGVFTKLTNLTLLDISENKIVILLDYTFQDLRNLKNLEVGDNDLVYISQRAFSGLLGLEQ
LTIEKCNLTAISAESLSYLQNLEVLRLRHLSISAVEDGNFKKLYNLLQLEIDNWPLLEDI
SPTGFQGLNLTSLSITYTNITAVPTAALRNLVYLMYLNLSYNPISTVPKGSFKDLLRLRE
LHMVGAFLVSVEPQAFSGLRQIRLLNLSNNFLSTLEESTFHSVNTLETLRVDRNPLACDC
RLLWILQRRKTLNFDGQQPMCSSPPEIQGNALRDFPDSILFEYFTCQKPKIRDRKLQHIT
AREGQSVSFLCRADGEPVPAIIWVSPQHRMITTKSTGRATVLPGGTLEIRFAQVQDSGTY
ICIASNAGGNDTYFATLTVKGHPVDGSLYANRTLYLSEFNDTFHNNTQVFLKFTLDLKTI
LVSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFTVEYSFRKVDGPTTTAGQGSARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgctctacacaatgacatgttggcttccagtcctgggcctccattggattcttctgagc
acagcccccgtggaggcctgcccggctcgctgcgagtgcgctcctcagatcaagtcggtg
gtgtgccatcgcaaacgcctcacctccatccccgaggggatccccaccgagaccaaggtt
ctggagctcagcaagaaccggatccgctgcctgaacccgggggacctgtccccttaccct
ttgctggaggaactcgatttaagcgagaacatcatcgtcagtgtggagcccggagccttc
agcaacctgtttcaccttcagatcttgcggctccgaggcaaccaactcaagctgatccct
tctggagtcttcaccaagctgaccaatctcaccctcctggacatcagcgagaacaaaata
gtcatcctgctggactacacgttccaggacctgaggaacctgaagaacctggaggtggga
gacaacgacttggtgtacatctcccaacgggctttctctggcctcctaggcctggagcag
ctgaccatagagaaatgcaacctgacggccatctcggccgaatccctttcctacctccaa
aacctggaggtcctgcggctccgacacctcagcatctccgcggtggaagatgggaacttc
aagaagctctacaatctcctgcagctggagatcgacaactggccgctgctggaggacatc
tcgcccaccggcttccagggcctaaacctcacgtcactctccatcacctacaccaacatc
acggcagtgcccacggccgccttgaggaacctggtgtacctcatgtacctgaacttgtct
tataaccccatcagcactgtgcccaagggctccttcaaggacctcctcaggctgcgagag
ctccacatggtgggtgccttcctggtctccgtggagcctcaagcgttctctggcttgagg
caaatccgcctcctcaacctctccaacaatttcctctccaccctggaggagagcaccttc
cattcagtgaacacgctggagacgctgcgcgtggacaggaacccgctggcctgcgactgc
cgcctcctctggattctacagcgccgcaagacgctcaacttcgacgggcagcagcccatg
tgctcctcaccccctgagatccagggcaacgccctgcgtgacttcccggactccatactc
tttgagtacttcacctgccaaaagcccaaaatcagggaccgaaagttgcagcacataaca
gcccgtgaagggcagtctgtctccttcctttgccgtgcagacggagagcccgttcctgcc
atcatttgggtctcccctcagcacaggatgatcaccaccaagagcactgggcgagccacc
gtcttgcccgggggcacattggaaatccgctttgcccaggtccaagacagtggcacctac
atttgcatcgctagcaatgccggaggcaatgacacctactttgccaccttgacagtcaag
gggcatcccgtggatggctccctttatgcaaaccggaccttgtacctcagcgagttcaac
gacaccttccacaacaacacgcaagtcttcttaaagtttacactggacctcaagaccatc
ctggtctccacagccatgggctgcatcaccttccttggggtcgtgctcttctgcttcctg
ctcctctttgtgtggagccgggggcggggacagcacaaaaacaacttcaccgtggaatac
tccttccgcaaagtggatggccccaccaccaccgccgggcagggcagcgccaggaagttc
aacatgaagatgatctga
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