KEGG   Trachemys scripta elegans (red-eared slider): 117869005
Entry
117869005         CDS       T07347                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03020  RNA polymerase
tst03420  Nucleotide excision repair
tst04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117869005 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117869005 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    117869005 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tst03021]
    117869005 (POLR2E)
   03400 DNA repair and recombination proteins [BR:tst03400]
    117869005 (POLR2E)
Transcription machinery [BR:tst03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117869005 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     117869005 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     117869005 (POLR2E)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117869005 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 117869005
NCBI-ProteinID: XP_034611348
LinkDB
Position
22:5046089..5052578
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacctaccggctctggaagatccgtaagaccatcatgcagctg
tgtcacgatcggggctatctggtgacccaggatgaattggatcagaccttggaagagttt
aaagcccaatttggcgataagcccagtgaagggagaccacggcggactgaccttacagtg
ctggtggcccataatgacgatcccacagatcagatgtttgtcttcttccctgaggagccc
aaggttgggataaagacaatcaagatgtactgccagagaatgcaggaagagaacatcacc
agggctctgattgtggtgcagcagggcatgactccctcagcaaagcagtcgttggtggac
atggctcccaaatacatcctggaacaattcctgcagcaggagctgctcatcaacatcaca
gagcatgagttggttccagagcacgtggtcatgacaaaggaagaagtaactgaattactg
gccagatataaactgagagagaaccagctccccaggatacaggctggagatcccgtggcc
aggtacttcggaataaagcgagggcaggtggtcaagatcataagaccgagtgagactgcc
gggcgctacatcacctaccgactggttcagtaa

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