Trachemys scripta elegans (red-eared slider): 117869006
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Entry
117869006 CDS
T07347
Name
(RefSeq) unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117869006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117869006
04131 Membrane trafficking [BR:
tst04131
]
117869006
03029 Mitochondrial biogenesis [BR:
tst03029
]
117869006
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117869006
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117869006
mRNA cycle factors
P-body specific factors
117869006
Membrane trafficking [BR:
tst04131
]
Others
Actin-binding proteins
Myosins
117869006
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117869006
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117869006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
117869006
NCBI-ProteinID:
XP_034611349
LinkDB
All DBs
Position
22:12316517..12367627
Genome browser
AA seq
1620 aa
AA seq
DB search
MGDMDPHIFAVAEDAYKQMSRNDENQSLIISGESGAGKTASAKYAMRYFALVGGSLGDSS
MEEKVLASSPIMEAFGNAKTTRNDNSSRFGKYVEICFSHEYRIVGATMKTYLLEKSRLTF
QAKTERNYHIFYQLCASAALPEFQGLGLGGAESFHYTNQGQCTHLEATDDAADLESTRNA
FSLLGVHESSQLELFSILASILHLGNIRLRAKDRHGESCFTEPDDEALGLFCTLLGVETS
QVSRWLCYRKLVTASETYVKPMSRQQALNSRDALAKHIYGQLFKWIVSRINKALRASCRQ
QASIGILDIYGFETFTVNSFEQFCINYANEKLQQHFNLHVFKLEQEEYMKEEIPWTFIDF
YDNQPCIDLIEAKLGILDLLNEECKMPKGSDASWAQKLYDRHLHHSPHFQKPKMSTDAFI
VHHFAGKVEYQCGGFLEKNQDTVHAELIGLLRASKKSALLAELFPEEGDGSIALPSRRSH
GSRVTVRPGRRSLPAPDKEHRKPISTQFKASLHKLMETLSSTAPHYVRCIKPNDRKRPFE
FDAKRAVEQLRACGVLETIQISASGYPSRWTYVEFFSRYRALMRPEELMGGDERQTCRLV
LERLLKDPSKYQCGKGKIFFRAGQVAFLEELRGRRLRAACVFIQKSLHCWLGRRRFLRMR
AAAICLQRFSRGFLARRLARRLRRTSAALTLQKNFKMALARRSYLRTQAAAVTIQAFARG
MFARRLHRQMVASQKAVVIQSAVRGWLARTKYLRVRRSVVYLQCCCRRMRARRELRRLRV
EARSVEHYKQLNKGMEIKVMQLQCKVDEQARENRSLSEQLSALRASHSEEVERLRSELRG
LREDKAQETRIRELQEQLQRVESEKSSSEGRLGREMEELKQRLTELEAMKSNLKEEKDAL
NQRIMEQSQELEDQLRRRVAAESQELLCQLEGERARYQSLVKECARLEQCCENLQDEVAF
HKRTPSLQRSPSSDSILDSECSYPSSLSTAPSRDDADQQSESPSQPLDQERGRWRQRHGW
RRIRSDSPPSSLDDDDGQDPYEKAYLLLLGQLNVVTEDLARTREELRRAKVQLAHERKPF
EIFKRRNIAEILGLNKSPEKMTEEDSMMEEDLKYAYDAVRVSNKLLESQLQEQQQQHEQE
LESLRLDVCSLRQLSTQQQSRIQDLQLRQGEDGLQPQIVQLKRENLDLAGQLDTRGKNLL
KLRKQLKTSVKQIQDLTASREAQLLEQKVKVEEMERPLDDAFEGMLGCKAEDEGRLIRTI
ITDFKPQHSPGAVPGLPAYVLFMCFRHADASHDEHRIHSLFTAAVSGIKRVVKKHSEDFD
VVALWLANTCCLINCLRQYGGDQSYRLANTPKQNQHCLRNFDLASHCQSLGDLAIQIYQQ
LIRVAQKQLKPMIVAAMLESETIQGLSARPPGYRKQPAAPAYTLDSLLQQLSSFHEALER
HQLEPVVVGQAFRQLLFTVSGVALNYLLLRRDACSWSQGVQLRYNVSQLEEWLRAKGLQQ
SGAMEVLRPLIQAAQLLQVKKTTEEDAEAICCLCTALSTPQIMKILRAYTPAAGLEERVR
PSFISSVENRLADRTPAGPRQLLVDTAHLFPVHLPFSCSPMQLDELRIPDSVNLTFLTRL
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacatggaccctcacatcttcgccgtggccgaggacgcgtacaagcagatgtcc
aggaacgacgagaaccagtcgctgatcatcagcggcgagtcaggtgctggcaagacggcg
tcggccaaatatgccatgcggtactttgccctggtcgggggatccctgggtgactccagc
atggaggagaaggtgctggcctcgagccccatcatggaggcttttggaaatgccaagacc
accaggaatgacaacagcagccgctttgggaaatatgtggaaatctgcttcagccatgag
tatcgcattgtcggggccaccatgaaaacctacctgctggagaaatcccgcctcaccttc
caggcgaaaaccgagaggaactaccacatcttctaccagctgtgcgcgtcggccgcgctg
ccggagttccaaggcttgggcctcggtggggccgaatccttccattacaccaaccagggg
cagtgcacgcaccttgaggcaactgacgatgctgctgacctggagagcacacgaaacgcc
ttctcgctattgggggttcatgagtcaagtcagctggaactgttcagcatcctggcctct
atcctgcacctgggcaacatccggctccgagcgaaggaccggcacggggagagctgcttc
actgagccagacgacgaagccctgggcctgttctgcacactgctgggtgtggagacgtcc
caggtgtcgcgctggctctgctaccgcaagctggtcacggccagcgagacctacgtgaag
cccatgtccaggcagcaggccctgaactcccgcgatgccctggccaagcacatctacggg
cagctcttcaagtggatcgtgagcaggatcaacaaggccctgcgggcgtcctgcagacag
caggcctccatcggcatcctggacatctacgggttcgagacgttcacagtcaacagcttc
gagcagttctgcatcaactacgccaacgagaagctgcagcagcacttcaacctgcacgtc
tttaagctggagcaggaggaatacatgaaggaggagatcccctggaccttcatcgacttc
tacgacaaccagccttgcatcgacctcatcgaggccaagctgggcattctggacctcctg
aatgaggagtgcaagatgcccaagggcagcgacgccagctgggctcagaagctatacgac
aggcaccttcaccacagcccccacttccagaagcccaagatgtccacagatgccttcatt
gtccaccatttcgcgggcaaggtggagtatcagtgcggcgggttcctggagaagaaccaa
gacactgtccatgcagagctgataggactcctccgcgccagcaagaagtctgcgctgctc
gccgagctcttcccagaggagggggacggcagcatcgccctaccctcccgcaggtcccat
gggtccagggtgaccgtccgccccggcaggaggtctttgccagctcctgacaaggagcac
aggaaacccatctccacccagttcaaagcgtcgctgcacaagctcatggagaccctgagc
agcaccgcgccccactacgtgcgctgcatcaaacccaacgaccgcaagcggcccttcgag
tttgacgccaagcgagcagtcgagcagctgagagcctgtggggtcctggaaaccattcag
atcagcgcctctggctatccatccaggtggacgtacgtggagttcttcagcaggtacagg
gctctgatgcgcccggaggagctgatgggcggtgatgagaggcagacctgccggcttgtc
ctcgagaggctgctcaaggaccccagcaaataccagtgtgggaagggcaagatcttcttc
cgtgctggccaggtggccttcctggaggagctgcgtggcaggaggctgagagcagcctgc
gtcttcattcagaagagccttcattgctggctggggagaagacgcttcttgcgtatgcga
gctgcggccatctgcctccagcgcttttcccggggcttcctggcccggaggctcgccagg
cgcctgaggaggaccagcgctgcgctcaccctgcagaagaacttcaagatggccctggcc
aggcgctcgtacctccgcacccaggcagcagcggtcaccatccaggccttcgcccgcggc
atgttcgccaggcgcctgcaccgccagatggtggcaagccagaaagctgttgtgatccag
agcgcagtgaggggctggctggctcgcaccaagtaccttcgggtgcgcaggtcggtggtc
tatctgcagtgctgctgccggcgcatgcgggctcgcagggagctgagacggctccgggtc
gaggcacggtcggtggagcactacaaacagctcaacaaaggcatggagatcaaagtgatg
cagctgcagtgcaaagtggatgagcaggccagggagaaccggagcctctcggagcagctg
tcggcactgagagcctcccacagcgaggaggtggagcggctgcgcagcgagctgcggggg
ctgcgggaggacaaggcgcaggagacgcgcatccgggagctgcaggagcagctgcagcgt
gtggagtcggagaagagcagctcggaaggcaggctgggccgggagatggaggagctgaaa
cagcgcctgactgagctagaagccatgaaatccaatctgaaggaagagaaggacgctcta
aaccagcggatcatggagcagtcgcaggagctggaagaccagctgcgccggcgcgtggca
gcggagagccaggagctgctgtgccagctggagggggagagggctcgctaccagagcctg
gtgaaagagtgtgcccgcctggagcagtgctgcgagaacctgcaggacgaagtggccttc
cacaagcgaacccccagcctccaaaggtccccttcatctgacagcatcctggactctgaa
tgcagctacccgtcgtctctgtcgacggcgccgtcccgggatgatgccgaccagcagagc
gagtccccatctcagcccctggaccaggagaggggccgctggaggcagaggcacgggtgg
aggaggatcagatccgacagccctccctcctcgctggatgacgatgatggccaggacccc
tacgagaaggcttatctcctcctcctgggacagctcaacgtggtcaccgaggacctggcc
aggacccgcgaggagctgcgcagggccaaggttcagctggctcacgagaggaagccattt
gagatcttcaagcgccggaacattgcagagatcctggggttgaacaagagcccagagaag
atgactgaggaagactcgatgatggaggaagacttgaaatacgcgtatgatgccgtccgg
gtttccaataagctactggagagccagctgcaggagcagcagcagcagcacgagcaggag
ctggaaagtctccgcctggacgtctgctccctgaggcagctgagcacgcagcagcagagc
cggatccaggacctgcagctgcgtcagggggaagacgggctccagccccagatcgtccag
ctgaagcgagagaacctggatctggcagggcagctggacaccagggggaagaacctgctc
aagcttcgaaagcagctgaaaacctccgtgaagcaaatccaggatctcacagcaagcaga
gaggcccagttgctggagcagaaggtgaaggtggaagagatggaaaggccccttgatgat
gcttttgagggcatgttggggtgcaaagcagaggatgaagggcgcctcatcaggaccatc
atcacagatttcaaaccgcagcacagccccggtgccgtccccgggctgccggcctacgtc
ctgttcatgtgcttccggcatgcggacgccagccacgacgagcaccggatccactcgctc
ttcaccgccgccgtcagtggcatcaagcgggtggtgaagaagcacagcgaggacttcgac
gtggtggcgctctggctcgccaacacctgctgcctcatcaactgcctgagacagtacggc
ggggaccagagctaccggctggccaacacccccaagcagaaccagcactgcctgaggaac
ttcgacctcgccagccactgccagagcctgggggacctggccatccagatctaccagcag
ctgatccgcgtggcccagaaacaactgaagcccatgattgtggccgccatgctggagagc
gagaccatccagggcttgtcggccaggccccccggttaccgcaagcagccggcggctccc
gcctacacgctggactcactcctccagcaactcagctccttccacgaggcgctggagagg
caccagctggagcccgtggtcgtgggccaggccttccggcagctcctcttcaccgtcagc
ggcgtggccctcaactacctgctcctcaggagagacgcctgttcctggagtcagggagtc
cagctcaggtacaatgtgagccaactggaggagtggctgcgggccaagggcctccagcag
agcggagccatggaggtcctgcggcccctcatccaggccgcccagctgctgcaggtgaag
aagacgacagaggaagatgccgaggccatctgctgcctgtgcacggcgctgtccactccg
cagatcatgaagatcctgcgggcctacacccccgccgccgggctggaggagcgcgtccgc
cccagcttcataagcagtgtcgagaaccgactggcggaccgaactccagccggcccccgt
cagctgctggtggacacggctcacctgttccctgtgcacctgcccttctcctgctctccc
atgcagctggatgagctccgcatccctgacagtgttaacctgacgttcctgacccggctc
tga
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integrated database retrieval system
