KEGG   Trachemys scripta elegans (red-eared slider): 117869062
Entry
117869062         CDS       T07347                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tst03036]
    117869062 (KDM4B)
Enzymes [BR:tst01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117869062 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117869062 (KDM4B)
Chromosome and associated proteins [BR:tst03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117869062 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 117869062
NCBI-ProteinID: XP_034611448
LinkDB
Position
22:complement(7599548..7759858)
AA seq 1122 aa
MGSENPSPQNPGCKIMTFRPTLEEFRDFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDGAVLDHMKPTALTSPELDAWNE
TKPELKAKLLRRMGDEEEDNKQNYRSHRKRSQPRRHKTEDQKSLGEVIAMETALEEVKMK
EELKRGPDLDEEERSKVSEGGEGDSKVKGRPPKVKGERKKKHPHHQHHHHHSHHLQPPPP
PLQQQLLPPPPPQPQQQPAEEEASAAQPLIPVAAPASAPAEKSLPSAPLNIVLPSEVPSE
DDDFKPRPIIPMLYVVPRTKKVVFEKERISCQQAFEQFATQKGQVWREQVVPLELTVKEE
ESGEAENADVATEVSDLQATSAFLKMKMEIKKSRRHPLGKPPTRSPLSVVKQEASSDEET
FPFSGEEDVSDPEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPFCAVCTLFYPYNQSL
QMDKEAVQVSTGESSSLLQLSKCGQKTKPLIPEMCFTSGGENTEPLPSNSYIGEDGTSLL
ISCAKCCLQVHASCYGIRPDLVNEGWSCSRCSANAWAADCCLCNLRGGALQMTTDGRWIH
IICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTS
FHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANHNIQFRREVSLGQTVITKNRNGLYYRC
KVIGMTTQTFYEVNFDDGSYSDNVYPESITSRDCIQMGPPPEGELVQLQWTDGIIYKAKF
IAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEGVFSGDEVKA
AKRPRVGNSRSPEDYGQNPDYLAFMETLLQTQYQPGPQSNMF
NT seq 3369 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccacagaaccctggctgtaagatcatgaccttccgtccc
accctagaggagtttcgggactttgggaaatatgttgcctacatcgaatcgcagggagct
catagggcagggcttgccaaggtgattcctcccaaggaatggaagccccgaaagacttat
gatgacatcgatgacatggtcatcccagcgcctatccagcaggtggtgactgggcagtcg
gggttattcacccagtataatatacagaagaaacccatgacggtgggggaataccggcgt
ctggccaacagtgagaagtactgtactcctcgccaccaagattttgaagacctggaacgc
aaatactggaagaatctgacattcgtctcaccaatttatggggcagatatcagtggctca
ctatatgatgcagatgtagaagaatggaatattgggaatctgaacaccctgttggacatg
gtggagcatgagtgtgggattatcatagaaggtgtgaacaccccctacctttattttggc
atgtggaaaacaacatttgcatggcatactgaggacatggatctctacagcatcaactac
ctgcattttggggagccgaaatcctggtatgccataccaccagaacacggcaagcgattg
gaacgcctggcaaaaggatttttcccaggaagctctcagggatgtgatgccttccttcgc
cacaagatgaccctcatttcaccctccatcttgaagaaatatggcatcccatttgaccgg
atcacccaagaggctggagagtttatgatcacatttccttacggctaccacgcgggattc
aaccacggcttcaactgcgccgagtccaccaactttgccacactgcggtggattgactat
ggcaaaatggctacgcaatgcacttgccgcaaagacatggtgaagatttccatggatgtt
tttgtgagggttctacagccggaacgttatgacttatggaaacaagggaaagatggtgct
gttctggaccacatgaaacccacagctctgaccagcccagagctggatgcctggaatgag
acaaagcctgagctgaaagctaagctgctccgcaggatgggagatgaagaagaggacaac
aaacaaaattaccggtctcacagaaaaagaagtcaacccagaaggcataaaacagaggat
cagaagtctcttggggaagtcatagctatggagactgccctggaagaagtcaaaatgaag
gaggagctgaaaagagggccagacctagatgaagaagagagaagtaaagtgtctgagggg
ggagaaggagacagcaaggtaaagggccgtccccccaaagtaaaaggcgagagaaagaag
aagcaccctcaccatcagcaccaccaccatcacagtcatcacctgcagccccctccgccc
cctttgcagcagcagctgttgccaccgcctcctccacagccccaacagcaaccggccgag
gaagaggcatcagcagcacagccactgattcctgtagccgcaccagcatcagccccggcg
gagaagagcttaccctccgctcccctcaacatcgtcctgccctcagaggtgccaagcgag
gacgatgactttaagccccgacccatcattcccatgctttatgtggttccacggaccaaa
aaggtggtctttgaaaaggagcgcatatcctgccagcaggcctttgagcagtttgccaca
caaaaaggccaggtttggcgggagcaggtggtccctttggagctcactgtgaaggaggag
gagagcggagaagcagaaaatgcagatgttgccactgaggtcagtgacttacaggccaca
tctgcttttttaaaaatgaagatggagataaagaaaagtcgccgtcacccactgggcaaa
ccaccaacccgctccccattgtctgtggttaaacaggaggcctcaagtgatgaggaaacg
tttccattttccggggaggaggatgtgagtgacccagaggctttgaagtctttactttcc
ctgcagtggaagaataaagcacataacttcccagctgagcgaaaattcaatgcagctgct
gccctgagcgagcctttctgtgctgtctgtaccctcttctacccttataaccagtcctta
cagatggataaagaggctgtccaggtctccacaggggagagctcctccttgctccagctt
tcaaagtgtggacagaagacaaaacctctgatccctgagatgtgctttacctcaggcggt
gaaaacacagagccccttccttcgaactcgtacatcggagaagatggaaccagcctcctg
atatcctgtgccaagtgctgcctgcaggttcatgctagttgctatggaatacgccctgat
ctggtgaatgaaggctggtcttgttcacggtgctcagccaatgcatgggcagcggactgc
tgcctgtgtaatctcaggggaggagctcttcaaatgaccactgatggaaggtggatccat
ataatctgtgctatcgctgtcccagaggcccgtttcctcaacgtaatagagcgccatcct
gtggacatcagtgctattccagagcagcggtggaaactgaaatgtgtgtactgccggaag
cggatgaagaaggtgtctggtgcctgcattcaatgctcctatgagcactgctccacttcc
ttccacgtgacctgtgcacatgccgctggggtacccatggaaccggatgattggccatat
gttgtgtccatcacttgcttcaaacataaagcagccaaccacaatatccagtttcggagg
gaggtatcgctggggcagactgtgattacgaagaaccgcaatggactctactacaggtgt
aaagtaattggcatgacaacgcaaaccttctatgaagtgaactttgatgatggctcttac
agcgacaacgtttacccggaaagcattactagcagagactgcattcagatgggaccccct
ccagaaggcgagttggttcagctgcagtggactgatggaatcatctataaggccaagttc
attgcagcccagatcagtcagatttatcaggtggagtttgaagatggctcccagctgatg
gtaaaacgtggtgatatttacacgttggaggaggagcttcctaagagagtgaaatctcgc
ctgtccctcagcactggggcccctcaggaaggagtgttttcgggagacgaagtgaaagca
gccaagcgcccccgtgtggggaattccaggagtcccgaggactatggacagaaccccgat
tatttggccttcatggagaccctgctgcagacgcagtaccagccaggaccacagagcaac
atgttttaa

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