Trachemys scripta elegans (red-eared slider): 117869115
Help
Entry
117869115 CDS
T07347
Symbol
GRIN3B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04020
Calcium signaling pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117869115 (GRIN3B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117869115 (GRIN3B)
04082 Neuroactive ligand signaling
117869115 (GRIN3B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117869115 (GRIN3B)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Glutamate (ionotropic)
117869115 (GRIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117869115
NCBI-ProteinID:
XP_034611532
LinkDB
All DBs
Position
22:complement(5220347..5239028)
Genome browser
AA seq
1031 aa
AA seq
DB search
MEFLRALWLCVGVAGSLLPAPCQGHPQPCHILARVGHTVRLGALLPPGGAQSRVRSALAR
ASRATWFPYNLSLELVPGAPRERDPASLARWLCQALVVQKVAAVLAFPRSREELLQLEFL
SAFLEIPFLSVVGLEQPLPFRTQNPFHLLMDRKSPMETLMDVLDSILQTNDWHEITLVLC
HAWDVSGFLDFWTSNTDLFLRTILDLSYLDEPGAARYLRQHLEELKEQAGPVLLFGCDAR
LSRLVFRAASASGLMLQDFHWMLGHPLNVDELQTEGLPLGLLAYGEVNSPTLEQFIQDAV
ELVSRAISSAMYIRPDLTLIQSMVNCNDKHVEGSESSGHYLSRFLANTSFHGRTGRVSVR
NTSLVHTEHRYRIWSLLRDSLGEPTWVTVGSWQDGKLEVEEGFWQTQLQHKSPGGGGGFS
RVKLRVVTLVEHPFVFTREVDEDGSCPAGLLCLDPHTNDSAVLEALFEALNAENGSVPLE
YKKCCYGYCIDLLEKLAEDLPFDFDLYIVGDGKYGAWKNGQWTGLVGDLLSGTAHMAVTS
FSINSARSKVIDFTSPFFSTSLGILVRTKDTASPIGAFMWPLHWTMWVGIFVALHLTALF
LTLYEWKSPYGMTPHGRNRMKIFSYSSALNLCYAILFGRTVSSKTPKCYTGRFLMNLWAI
FCLLVLSSYTANLAAVMVGEKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEEYIKKSFP
EMHEYMRRHSVPTTPAGVTMLKTEPPTLNAFIMDKSLLDYEVTIDSDCKLLTVGKPFAIE
GYGIGLPQNSPLTSNLSEFISRYKSAGFMDLLHDKWYKMVPCGKRVLAVTETLQMGIYHF
SGLFVLLCVGLCGSLLTSLGEHVFYHLILPRIKRKKKFNYWLHTSQKIHRALNVGFEEQK
NQKLRLEKRCNIQKSEEAPAPNPSQPSWNNLRKATRKEDKRVHFNMEQTPSEPAQEREVP
VWHCTNGRVPQPEEWDASEKELRELEGRIQAIRDQLRAALVRKSELVVALGPTKNIRMLP
VKPSVEKNEDR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctgcgggcgctctggctgtgcgtgggggtggcgggcagcctcctgccggcg
ccctgccaggggcacccccagccctgccacatcctcgccagggtcgggcacacggtgcgc
ctgggcgcgctgctgcccccggggggagcgcagagccgggtgcgcagcgccctggccagg
gcgagccgggccacctggttcccctataacctgagcttggagctcgtgccgggggctccc
cgggagcgggacccggcgtccctggctcgctggctgtgccaggcgctggtggtgcaaaag
gtggcggccgtgctggccttcccccggtcccgggaggagctgctccagctggagttcctc
tccgccttcctggagatccccttcctcagcgtcgtggggctggagcagccgctgcccttc
cgcacccagaatcccttccacctgctcatggaccggaagagccccatggagaccctgatg
gacgtgctggacagcatcttgcagaccaacgactggcacgagatcaccctggtgctgtgc
cacgcctgggacgtttctggcttcctggatttctggaccagcaacaccgacctcttcctg
agaaccatcctggacctgagctacctggacgagccgggcgccgcccgctacctccgccag
cacttggaggagctcaaggagcaggccggcccggtgctgctctttggctgtgacgcccgc
ctctcacggctggtgttcagggcggcctcggcgtccggcctgatgctgcaggactttcac
tggatgctggggcacccgttgaacgtggacgagctgcagacggaggggctgcccctgggc
ctcctggcttatggggaggtcaacagccccacgttggagcaattcatccaggacgcggtg
gagttggtatcccgggccatctccagcgccatgtacatccggcccgacctcaccctcatc
cagagcatggtgaactgcaacgacaagcacgtggaaggctcggagtcctctgggcactac
ctctccaggttcttggccaacacgtcgttccacgggcggacggggcgggtgtctgtgcgg
aatacgtcgctggtgcacaccgagcaccgctataggatctggagcctgctgcgcgactcc
ctgggggagcccacctgggtgacggtgggcagctggcaggacggcaagctggaggtggag
gaagggttctggcagacccaactgcagcacaagagcccgggcggcgggggcggcttctca
cgggtgaagctgcgggtggtgacgctggtggagcacccgtttgtcttcacgcgggaggtg
gacgaggacgggagctgcccggccgggctgctgtgcctggacccccacaccaatgactcg
gccgtgctggaggccctcttcgaggcgctcaatgccgagaacggctcagtgcccctggag
tacaagaagtgctgctacggctactgcatagacctgctggagaagctggctgaggacctg
cctttcgatttcgacctctacatcgtcggggacggcaagtacggggcctggaaaaacggg
cagtggacggggctggtgggggacctgctcagcggcacggcccacatggccgtcacctcc
ttcagcatcaactcggccaggagcaaggtcatcgacttcaccagccccttcttctccacc
agcctgggcatcctagtgaggaccaaggacacagcctcgcccatcggcgccttcatgtgg
cccctgcactggaccatgtgggtggggatctttgtggccctgcacctgacggcgctcttc
ctgaccctctacgagtggaagagcccctatggcatgaccccgcacgggcgcaaccgcatg
aagatcttctcctactcctcggccctcaacctctgctacgccatcctcttcgggcgcacc
gtctccagcaagacgcctaagtgctacaccggccgcttcctcatgaacctctgggccatc
ttctgcctcttagtgctctccagctacacggccaacctggctgccgtcatggtgggggag
aagaccttcgaggagctctcggggatccacgaccccaagctgcaccatccctcgcagggc
ttccgcttcggcaccgtgtgggagagcagcgccgaggagtacatcaagaagagcttcccc
gaaatgcacgagtacatgaggcgccacagcgtccccaccacccccgccggggtcaccatg
ctcaagaccgagccccccacgctcaacgcgttcatcatggacaagtcccttctggattac
gaggtcaccatcgactcggactgcaagctcctcaccgtggggaagccgtttgctattgaa
ggctatggaattgggctcccccagaactcgcccctgacctccaacctctccgagttcatc
agccgctacaagtcggccggcttcatggacctgctgcacgacaagtggtacaagatggtg
ccctgcggcaagcgggtcttggccgtcaccgagacgctgcagatgggcatctatcacttc
tccgggctcttcgtgctgctgtgtgtcgggctctgcggctccttgctcacctccctgggc
gagcacgtcttctaccacctcatcctgccccgcatcaagaggaagaagaaattcaactac
tggctgcacaccagccagaaaatccaccgggcgctgaacgtgggcttcgaggagcagaaa
aaccaaaagctgagacttgagaaaaggtgcaatattcagaagagcgaagaggcaccagcc
ccaaatcccagccagccaagctggaataacctcaggaaggccaccaggaaagaggacaag
cgggtgcatttcaacatggagcagacgccctctgagccggcgcaggagagggaggtgccc
gtgtggcactgcacaaacggcagggtgccccagccggaggagtgggatgctagtgagaag
gagctcagggagctggagggacggatccaggcaatcagggatcagctgagagcggccctg
gtgcggaagagcgagctggtggtggccttggggcccaccaagaacatccgcatgctgcct
gttaagcctagtgtcgagaagaacgaggacaggtaa
DBGET
integrated database retrieval system
