Trachemys scripta elegans (red-eared slider): 117869147
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Entry
117869147 CDS
T07347
Symbol
PSMC5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117869147 (PSMC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tst03051
]
117869147 (PSMC5)
Proteasome [BR:
tst03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117869147 (PSMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
FapA
AAA_17
PhoH
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
Sigma54_activat
DUF7006
bpMoxR
ABC_tran
DUF5906
RNA_helicase
AAA_11
Zeta_toxin
AAA_19
TsaE
HR1
Motif
Other DBs
NCBI-GeneID:
117869147
NCBI-ProteinID:
XP_034611580
LinkDB
All DBs
Position
23:complement(4109429..4122842)
Genome browser
AA seq
411 aa
AA seq
DB search
MPAEKMAVDGPEQMEMDEGKGGTGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAK
VRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVA
LRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELF
EALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF
VMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT
NRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGAS
GAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggagaagatggcggtggacgggccggagcagatggagatggatgaaggcaaa
ggggggacaggtctccgccagtactacctgtccaagatcgaggagctgcagctcatcgtg
aacgagaagagccagaatctccgccgcctgcaagcgcagaggaacgagctgaatgccaaa
gtacgcctgttgcgggaggagctgcagctgctgcaggagcagggctcctacgtcggcgag
gtggtgcgggccatggataagaagaaggtgcttgtcaaggttcacccagaagggaagttt
gtggtggatgttgataaaaacattgacatcaatgatgtgaccccgaactgccgcgtggcg
ctgaggaacgacagctacacgctccacaaaatcctgcccaacaaagtggacccactggtg
tccctgatgatggtggagaaggtcccggactccacctacgagatgattggcggcttggac
aagcagatcaaggagatcaaggaagtgatcgagctgcccgtcaaacacccggagctcttt
gaggccctggggatcgcccagcccaagggcgtgctgctgtacggaccgcccggcaccggg
aagaccctgctcgccagggctgtggctcaccacactgactgtaccttcatccgtgtctcg
ggctcggaactggtgcagaagttcattggcgagggtgcgcgcatggtgcgggagctcttt
gtgatggccagggaacacgcgccctccattatcttcatggatgagatcgactccatcggc
tcctcgcgcctggagggcggctctgggggggacagcgaggtgcagcgcaccatgctggag
ctcctcaaccagcttgatggcttcgaggccacgaagaacattaaggtgatcatggccact
aaccgcatagacatcctggactctgctctgctgcgcccgggccgcatcgacaggaagatc
gagttcccgcctccaaatgaagaggctcgcctagacattctcaagatccactctcggaaa
atgaacctgacgcgggggatcaacctgcgtaaaattgcagagctgatgccaggagcgtcg
ggggccgaggtgaagggggtgtgcacggaagccggcatgtacgccctgagggagaggagg
gtgcatgttacacaggaagattttgaaatggccgtagccaaggtgatgcagaaagacagc
gagaagaacatgtccatcaagaagctctggaagtaa
DBGET
integrated database retrieval system
