Trachemys scripta elegans (red-eared slider): 117869203
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Entry
117869203 CDS
T07347
Symbol
GFAP
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117869203 (GFAP)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117869203 (GFAP)
Membrane trafficking [BR:
tst04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117869203 (GFAP)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
117869203 (GFAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
YwqH-like
TolA_bind_tri
FlgN
DUF1664
Motif
Other DBs
NCBI-GeneID:
117869203
NCBI-ProteinID:
XP_034611722
LinkDB
All DBs
Position
23:complement(654823..682709)
Genome browser
AA seq
448 aa
AA seq
DB search
MSRSMESQRLSSYRRRFGPQATAVQQPLRSSPLFWLMAPSPSTRVSMTKKKSSSLSIHAS
PRFFQDKADFSLADALNTEFKETRTNEKVEMMELNDRFASYIEKVRFLEQQNKVLVAELN
QIRDKEPTKLADIYQDELRELRRQVDQLSNAKTRLEIERENLLDDVNGLRQKLQDEINLR
LEAENNLSSYRQDVDNAALVRLDLERKVESLQEEINFLRKVHEEELRELQEQLVQQQVHI
EMDMSKPDLTAALREIRIQYESMASNNMHETEEWYKSKFADLTDAAARNIEALRLAKQEA
NEYRRQLQALTCDLESLRGMNESLERQLREMEDRYAIETASYQDTVIRLEEDIQNLKEEM
ARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITIPVQTFSNLQIRETSLDTKSVSEA
HLKRNIVVKTVEGRDAEVIKESTQEHKD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcatggagagtcagcgactgtcttcatatcggcggcggtttggcccccaa
gccaccgctgtccaacagcccctgagatcctcgcccctcttctggctcatggcccccagc
cccagcaccagagtctccatgaccaagaagaagagttccagcctgagcatccatgccagc
cccaggttcttccaggacaaggcagatttctccctggccgatgccctcaacaccgagttc
aaggagacacgcaccaacgagaaggtggagatgatggagctgaacgaccgcttcgccagc
tacatcgagaaggtgcgcttcctggagcagcagaacaaggtgctggtggcggagctcaac
cagatcagagacaaggagcccaccaagctggccgacatctatcaggacgagctgagagag
ctccgccggcaggtggaccagctgtctaatgccaagaccaggctggagatcgagagggaa
aatctgctggatgacgtcaacggcctccggcaaaagttacaggacgagattaatctacgg
ctcgaagctgagaacaatttgtcttcctacagacaggatgttgacaatgctgcattagtg
cgcctggacctggagcggaaagtcgagtccctgcaggaggagatcaactttctgaggaaa
gtccatgaggaggagctgagagagctgcaggagcagctggtgcagcagcaggtccacatt
gagatggacatgtcaaaaccggacctgacggcggcgctgcgggagatccgcattcagtac
gagtccatggcctccaacaacatgcacgagaccgaggagtggtacaagtccaagtttgca
gacctgacagacgcggcagctcggaacattgaagccctgcgcctggccaaacaagaagcc
aatgagtaccggcgccagctccaggcactcacctgcgacctggagtccctgcggggaatg
aatgaatccctggagaggcagctgcgggagatggaggaccgctatgccattgagacagcc
agttatcaggacacagtcatccggctggaggaggacatccagaacctcaaggaggagatg
gctcggcacctccaggaataccaggacctgctcaacgtcaagctggccttggacattgag
attgccacctaccgcaagctcctggagggagaggaaagcaggatcaccatccccgtgcag
accttctccaacctgcagatccgagagaccagcctggataccaagtcagtgtctgaggct
cacctgaagaggaacatcgtggtcaaaactgtggagggcagagatgcagaggtgatcaag
gaatccacccaggagcacaaggactaa
DBGET
integrated database retrieval system
