Trachemys scripta elegans (red-eared slider): 117869235
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Entry
117869235 CDS
T07347
Symbol
SCML2
Name
(RefSeq) sex comb on midleg-like protein 2 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117869235 (SCML2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117869235 (SCML2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
117869235 (SCML2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117869235
NCBI-ProteinID:
XP_034611804
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All DBs
Position
1:210915056..211034730
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AA seq
728 aa
AA seq
DB search
MGRTAAKDSKNVKKEKHGKSQQSNNVSLKNEHFKWDNYLKETGSLAAPPHCFRQSRIPPS
NDFKVGMKLEAHDPRNVTSVCIATVIGITGARLRLRLDGSDNKNDFWRLVDSSDIQPIGT
CEKKGGMLQPPLGFQMNASSWPMFLLRTLNGAEMAPAAFFKKEPPKPAPDYFKVGMKLEA
VDKKNPYLICPATIGDVRGDEVFITFDGWRGAFDYWCKYDSRDIFPVGWCGLTGDALQPP
GNNVSITKRGAKAQSSPSKVTRRSMQSPQKSAPVPAQCGRKTGRGNPPGQSTVPRKGKSP
KTIPLTKITSTENLKTRKKGLKPGRKKKILPVKSPPASSPPLTSPEGDNGNTQIHKDGVG
IAGATAAVISTVCVYVNKHGNSGPHLDKKKVQQLPDHFGPGPVNVVLQQAVQACVDCAYL
SKTVFGFLKSGHHGGEMITAAFDGEKRAINLPSVNSASFVLRFLEKLCHSLQCDNLFSSQ
PFSPYMGSAHSPTEYDRNKPAKEEISENRSTKRYSQDSPPYTVPLSPKLPRPDAHPSEAE
TLPTEENGTPKEHRFSEDSMDSALNSVNPSSPTCRNSNEYRISGSAAYYRNSLQPVTAAS
NSAPILHRLSSSSAGNSSYYEVNRNRMQRRIEAASSTTGPDLSALKREPSRVPNQDPSTW
SIDEVMRFVKDADPQALAPHAELFRRHEIDGKALLLLRSDMIMKYMGLKLGPALKLCYHI
ERLKQGKY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggggagaacagcagctaaagattcaaagaatgttaaaaaggagaaacatgggaagagt
cagcagtcaaacaatgtgtctttaaaaaatgaacactttaagtgggataattacttgaaa
gagactggatcgctagccgctcctccacattgtttcagacagtctaggatcccacctagc
aatgatttcaaagttggtatgaaactggaagcccacgacccacgcaatgttacctcagtg
tgtatagctacagtaattggaatcactggtgccagattaaggttgcggcttgatggaagt
gacaacaaaaatgacttttggaggcttgtggattcctctgacatacagccaattgggacc
tgtgaaaagaaaggggggatgctccagccgccactcggtttccagatgaatgcatcatct
tggccaatgtttctgttaagaacactaaatggagctgaaatggcaccagcagcattcttt
aagaaggaaccaccaaaacctgctccagactattttaaagttggaatgaaacttgaagca
gtagacaaaaagaacccttatttaatttgcccggcgaccattggagatgttagaggagat
gaagttttcattacatttgatggctggcggggagcatttgactattggtgcaaatatgat
tctcgagatatcttcccagtcggatggtgtggcttaacaggagatgcactacagccacca
ggcaacaatgtttccattacaaaaagaggtgcaaaagcccagtcttccccttccaaagtg
accaggcgttcaatgcagtctccacagaagtctgctccagtaccagcacaatgtggcagg
aaaacaggtcggggcaacccccctggacaatctacagttcctaggaagggaaaatctcct
aaaaccattcctctgacaaaaatcacctctacggaaaatctcaaaacaaggaaaaaaggt
ttaaaacctggaagaaagaaaaaaatcttgccagtgaaatctcctcctgcatcttctcct
ccacttacttctcctgagggggacaatggcaatacacagatacataaagatggagttggc
attgctggtgcaacagcagcagttatatccacagtttgtgtctatgttaacaagcatggg
aactctggacctcacctggataagaagaaagttcagcagcttccagaccactttggacca
ggtcctgtaaatgtggtacttcagcaggctgtgcaggcctgtgtagactgtgcctattta
tccaaaacagtctttggattcctcaagtcagggcatcatggaggggagatgataacagcc
gcctttgatggggagaaacgtgccatcaatcttccttctgtaaacagtgcatcgtttgtc
ctgcgtttcttggagaagctctgccacagtctgcagtgtgataatctttttagtagccag
cccttcagcccttatatgggaagtgcacatagtcctacagagtatgataggaacaaacca
gcaaaagaggaaatatcagaaaacagaagtactaaacgatattctcaggattctccaccc
tacactgtccctctctcccctaaactccccagacctgacgctcacccatctgaagcagaa
acattgccaactgaagaaaatggcactcccaaagaacaccgattttctgaggactctatg
gattctgcactcaattcagtaaatccttcaagcccaacctgccgaaattccaatgaatac
cgtatctcagggagtgcagcatattacaggaattcccttcaaccggtgactgctgcttca
aactcagccccaatcttacacaggctgtcatcaagctctgctgggaacagcagttactat
gaagtcaataggaatcgaatgcagaggaggattgaagccgcaagttctacaacaggtcct
gatctcagtgcactaaaaagggaaccctcacgagtaccaaatcaggatccttctacctgg
tcaatagatgaagtcatgcgatttgtgaaagacgctgatcctcaggcattagcacctcat
gcagaactcttcaggagacacgaaattgacggaaaggcactactgttactaaggagcgat
atgataatgaaatatatgggactgaagttggggccagcattaaagctatgctaccatatt
gagagacttaaacaaggaaagtactag
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