Trachemys scripta elegans (red-eared slider): 117869281
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Entry
117869281 CDS
T07347
Symbol
CCDC47
Name
(RefSeq) coiled-coil domain-containing protein 47
KO
K24962
PAT complex subunit CCDC47
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tst03110
]
117869281 (CCDC47)
04131 Membrane trafficking [BR:
tst04131
]
117869281 (CCDC47)
Chaperones and folding catalysts [BR:
tst03110
]
Other chaperones and cochaperones
Others
117869281 (CCDC47)
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
117869281 (CCDC47)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
117869281
NCBI-ProteinID:
XP_034611881
LinkDB
All DBs
Position
23:complement(8035670..8055590)
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AA seq
583 aa
AA seq
DB search
MSRGCDVSSGAAAPLPGNRKGRPVVAHVVGREQESPPARRPGTQREAAVPAGRLGAAAEP
EPRLPARTAPALTYAKRAAGAACAGELGLGGGRARRPDSVTMRSLWIFLAVLFASWGFSL
AKFDEFEDGDDIVEYDDNDFAEFEDVTEDVTTDSPQRIITTEDDEEEATVELEGHDENQE
DFDDADAQEGDTESEPYDDEEFEGYEEKTDASPSKSKDPITIVDVPAHLQNSWESYYMEI
LMVTGLLAYIMNYIIGKNKNNRLAQAWFNTHRELLESNFALVGDDGTNKEATSTGKLNQE
NEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARMMRPACDQVQIKVTMNDEDMDTYV
FAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPESLAILSEMGEITEGMMDTKMVHF
LTHYADKIESVHFSDQFSGPKLMQEEGQPLKLPDTKRTLLFTFNVPGSGNTSPKDMEALL
PLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAE
KERIMNEEDPEKQRRLEEAALRREQKKLEKKQMKMKQIKVKAM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggggctgcgacgtgagctccggtgctgccgcgccgttgccgggcaaccggaaa
gggcggccggttgtagcgcacgtggtggggcgtgagcaggagtccccccccgctcgcagg
cccggaactcagcgcgaggccgctgttcccgcgggccgcctgggagcggcagcagagccg
gaaccccgcctccctgctcgcactgcgcctgcgctcacctacgcaaagcgcgcagcgggc
gcagcttgcgcgggggagctgggcctaggtggcgggcgcgcgcgccggccggactcagtg
acaatgaggagcttgtggatcttccttgctgttttgtttgcctcatggggcttttctttg
gctaagtttgatgaatttgaggacggagatgacattgtggagtacgatgataatgacttt
gctgagtttgaagatgttactgaagatgtaaccacagactctccccagaggatcataacc
acagaagatgatgaggaagaggccactgtagagcttgaaggtcacgatgagaatcaggag
gactttgatgatgcagatgcacaggaaggagatactgagagtgagccatatgatgatgag
gaatttgaaggctatgaagagaaaacagatgcatctcccagcaaaagcaaagaccccata
acaattgttgatgtccctgcacatcttcaaaacagttgggagagttactacatggagatc
ttaatggtaactggtcttcttgcgtacatcatgaactacatcattgggaagaataaaaac
aaccggctagctcaggcctggttcaacactcacagggagttgctggaaagtaactttgcc
cttgttggggatgatggcacaaataaagaagctacaagcacagggaagctcaaccaagaa
aacgaacacatatacaacttatggtgctctggcagggtgtgctgtgagggaatgcttatc
cagctaaagtttctcaagaggcaagaccttctgaatgtacttgctcgtatgatgaggcca
gcctgtgaccaagtgcaaataaaagtaacaatgaatgatgaagatatggatacctatgtg
tttgctgttggaacaagaaaagccttagtgcgacttcagaaggaaatgcaggacctgagt
gagttctgcagtgacaaacccaagtcaggggcaaagtatgggcttccagagtcgctggct
atcctgtcagagatgggagagatcacagagggaatgatggacacaaagatggtacatttc
ctcacacactacgctgacaagattgagtccgtccatttttcagaccagttctccggtcca
aaacttatgcaagaggagggtcagcctttaaaactgcccgacactaaaaggacactattg
tttacatttaatgttcctggttcaggcaacacttccccaaaggatatggaggctttgctg
cctttgatgaacatggttatttattctattgacaaagcgaaaaagttccgtctaaataga
gaaggtaaacaaaaagctgataagaacagggccagagtagaagagaacttccttaaactg
actcatgtgcaaaggcaggaggctgcccagtcccgccgggaagagaagaaacgggcagag
aaggagcgaattatgaacgaggaagatccggagaaacagcgccggctggaggaagctgct
ttgcggcgtgagcagaagaaacttgagaagaagcagatgaagatgaagcaaataaaagtg
aaagccatgtga
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