Trachemys scripta elegans (red-eared slider): 117869307
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Entry
117869307 CDS
T07347
Name
(RefSeq) keratin, type I cytoskeletal 19-like
KO
K07604
type I keratin, acidic
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117869307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117869307
04147 Exosome [BR:
tst04147
]
117869307
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117869307
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117869307
Exosomal proteins of other body fluids (saliva and urine)
117869307
Exosomal proteins of colorectal cancer cells
117869307
Exosomal proteins of melanoma cells
117869307
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CENP-F_leu_zip
Leu_zip
TolA_bind_tri
TPR_MLP1_2
SPATA1_C
HB_LcnD
GapR_DNA-bd
Peptidase_M2
Baculo_PEP_C
Myosin_tail_1
Rod_CreS
HH_AprE
FlxA
Motif
Other DBs
NCBI-GeneID:
117869307
NCBI-ProteinID:
XP_034611927
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All DBs
Position
23:complement(14082814..14090269)
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AA seq
504 aa
AA seq
DB search
MSFSTKQTVTLSTKGRSSGGSCVVGGGGGGRISSVSSGRYSSYGIGSGRGFSGRSYSGGA
SCGAGLSAGSFSGGSYGGVVAGGHPGYGYGGCSSIGFGGGTHCGYGGGFGGAVGGGFGGA
VGGGFGGGGICGDGVFVTCDEKLTMQNLNDRLASYLDKVRCLEEENAALECKIKEWYAHH
GHTGVPKDYSCYYKEIEDLQNQIVCATLDNNKIILNIDNSRMAADDFRLKFETELALRQS
VEADINGLRHVLDELTLCRSDLEAQLECLKEELCCLKKNHEEEITCLRNQSTGDVSVEVN
SCPGPDLKKILEEMRCQYETMIAQNRKEVEDWYECKIEEVNREVITSSQEVESCNSQVAE
LRRQLQCLEIDLQSHLSQRDNLEASLAETESRYNSHLCQLQQQITCVEQQLADLRSEIES
QNHEYKVLLDVKCRLEQEIHTYRCLLEGGQRDIVGSEGGFGVAGGIGGGTVIKTSHCYSS
SHSVPHVTPCHPGDLKGHGRKICD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagcaccaagcagactgttactctctctaccaaagggaggagtagtggtggt
agctgtgtggttggaggtggtggtggaggaaggatttcttcagtctcttctggaagatat
agctcctatgggataggcagcggtagaggcttttcgggtaggagttacagtggtggtgcg
agttgcggagcgggactgagtgctggtagcttttctggaggtagctatggaggtgtcgta
gcaggaggtcacccaggatacggctatggaggttgttccagcattgggttcggtggtggc
acccactgtggatatggaggtggctttggtggtgccgttggtggtggttttggtggtgca
gtcggtggtggctttggtggtggtggtatttgtggagatggcgtatttgtcacctgtgat
gaaaagctgaccatgcagaaccttaatgaccgcctggcttcttacctggacaaggtgcga
tgcctggaggaagaaaacgctgccctagagtgcaaaatcaaggaatggtatgcccatcat
ggacacaccggtgtaccaaaggactacagctgctactataaggaaatagaagatcttcaa
aatcagattgtttgcgctaccctagacaacaacaagatcattctgaacattgataacagc
aggatggcagctgatgacttcagactgaagtttgagactgagctggcccttcgccagagt
gtggaggccgatatcaatggcttacgccacgttctggatgaactgaccctgtgcaggtct
gacctggaggcgcagctggagtgcctgaaggaagagctgtgttgtctgaagaagaaccat
gaggaggaaatcacttgtctgagaaaccagtccactggtgatgtcagcgtggaggtcaat
tcctgtcctggcccagatctgaagaaaatcctagaggagatgagatgccagtatgaaacc
atgattgcacaaaatcgcaaagaggttgaggactggtatgaatgcaagattgaggaggtg
aatcgtgaggtcatcacaagcagtcaggaggttgagtcgtgcaacagccaggttgctgaa
cttagacgccagttgcagtgcctggagatagatctgcaatcccatcttagccagagggac
aacctggaagcctctttggctgaaactgaaagtcgctacaacagccacctgtgccagtta
cagcaacagatcacctgtgtggagcagcaactggctgacctgcgatcagaaattgagtct
cagaaccacgagtacaaggtcctcctggatgtcaaatgtcgactggagcaggagattcac
acttaccgctgcctgctggaaggaggacagcgtgacattgttggctcggaaggagggttt
ggcgtagcaggtggcataggaggaggaacagtcattaaaacttcccactgctactcttct
tcgcactctgtcccacatgtcacgccttgccaccctggtgatctaaaagggcacggcaga
aagatttgtgactaa
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