Trachemys scripta elegans (red-eared slider): 117869317
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Entry
117869317 CDS
T07347
Name
(RefSeq) P43 5S RNA-binding protein-like
KO
K09191
general transcription factor IIIA
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117869317
03021 Transcription machinery [BR:
tst03021
]
117869317
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117869317
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
117869317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
TFIIIA_zf-C2H2
zf-H2C2_2
zf-DNA_Pol
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
117869317
NCBI-ProteinID:
XP_034611954
LinkDB
All DBs
Position
23:12523930..12530206
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AA seq
399 aa
AA seq
DB search
MAEARLQEEAVGSSTFLGGVLASDLFACPHKECGAVFGKERRLQKHLAVHVGETAPLSDQ
AGRGKRFRRRSSRQMPKQQQGDASLNSRLDVDCKSAFVPKNHLPKHCRAQHGAAKSFQCS
YQGCESTFRKKKALRAHWTEHTTVLPFVCQEPGCTMKFASAAKRKAHQRKHAGYLCPKPD
CGTVLSTWTAHQEHLQQHPVEYKCQLCPKIFKKPGGLRRHKSFHSRQKRALPKPTWACPK
ADCQVSFTTIFNLESHIRKVHLQLLKYRCYFAGCEKAFAMRESLIRHLTVHDPTKKKLKP
QRCRPSRKSRRQVLVEENLHQLFSQKLYVRLKHSRSGFPAGEHGPGRLGHTLLLRVKAKL
ESDLSGLFNERPGCHAVEPEVNLSALFRLPPTSRPQEVA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcaagactgcaggaggaggctgtgggaagcagcaccttccttgggggtgtt
ttggcctctgacctctttgcctgcccccacaaggagtgtggtgctgtgtttggcaaggag
agaaggctacagaagcatcttgctgtgcatgtgggggagacggctccgctgagtgaccag
gctggccgtggcaagagattccgccgcagaagctctcggcagatgcccaagcagcagcag
ggtgatgccagtctgaacagccgcttggatgtggactgcaaatctgcctttgtgcccaag
aaccacctgccaaagcactgcagggcccagcatggtgcggccaagtccttccagtgcagc
taccaaggctgtgagagcaccttcaggaaaaagaaggccctccgggcccattggaccgag
cataccacggtgctgccgtttgtgtgccaggagcccggctgcaccatgaagtttgccagc
gctgccaagaggaaagctcaccagaggaaacatgccggatacctgtgccccaagccggac
tgtgggactgtcttgtccacctggacggcgcatcaggaacacctgcagcagcatcctgtg
gagtacaagtgccagctgtgcccaaagatcttcaagaagccgggtggcctgcggcggcac
aagtccttccacagccggcagaagcgggcgctgccgaagccgacgtgggcgtgccccaaa
gctgactgccaggtctctttcaccaccatcttcaacctggagagccacatccggaaggtg
catctgcagctgctgaagtatcgttgctacttcgctggctgtgagaaggcctttgccatg
cgggagagtctaatccggcacctgacagtccatgaccctacaaagaagaaactgaagccg
cagcgctgccggcccagcaggaagagccggcggcaggtgctggtggaggagaacctgcac
cagctcttcagccagaagctctatgtgcgactcaagcacagccgctcgggcttcccggcg
ggggagcacggccccgggcgcctgggccacacgctcctcctgcgcgtcaaggccaagctg
gagagcgacctgtcggggctcttcaacgagcgccccggctgccatgctgtggagcccgag
gtgaacctcagtgccctcttccggctgcccccgacctccaggccgcaggaggtggcctag
DBGET
integrated database retrieval system
