Trachemys scripta elegans (red-eared slider): 117869333
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Entry
117869333 CDS
T07347
Symbol
NGFR
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tst04010
MAPK signaling pathway
tst04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117869333 (NGFR)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117869333 (NGFR)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117869333 (NGFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
tst04050
]
117869333 (NGFR)
04090 CD molecules [BR:
tst04090
]
117869333 (NGFR)
Cytokine receptors [BR:
tst04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117869333 (NGFR)
CD molecules [BR:
tst04090
]
Proteins
117869333 (NGFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
Death
Death_EDAR
TPR_21
Motif
Other DBs
NCBI-GeneID:
117869333
NCBI-ProteinID:
XP_034611990
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Position
23:complement(9900187..9938823)
Genome browser
AA seq
418 aa
AA seq
DB search
MEKKLLVLVLVVVVPGGPAWAAKEKCLTKKYTASGECCRACNLGEGVAQPCGVNQTVCEP
CLDSVTYSDTVSATEACKPCTECVGLQSMSAPCVESDDAVCKCIYGYYQDEGSGQCKECD
ICEVGYGLMFPCGYTQNTVCEKCPDGTFSDEANHMDPCLPCTICEENEVLIKECTPVSDA
ECRDLHPRWTARTPTLMGSDSPMPFTKDPYDTEGLASTLADTVTTVLGSSQPVVSRGTAD
NLIPVYCSILAAVVVGLIAYIAFKRWNSCKQNKQGANNRPVNQTPSPEGEKLHSDSGISV
DSQSLHDQQPPTQTAQVQALKGDGNLYTSLPPNKQEEVEKLLNSSPEDTWRHLAGELGYK
EDHIDSFTQEECPVRALLSDWSSKDSATMDALYSALRRIQRGDIVESLYSESTATSPV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagctgctggtgctggtgctggtggtggtggtcccaggggggccggcctgg
gccgcgaaggagaagtgtctcaccaagaagtacaccgccagtggggagtgctgtagagcc
tgcaacctgggagaaggggtagcgcagccctgtggggtgaatcagacggtctgtgagcca
tgcctggacagcgtgacctactcggacaccgtcagcgccacggaggcgtgcaagccgtgc
acagagtgcgtgggcctgcagagcatgtcggctccctgcgtggagtcggacgacgccgtc
tgcaaatgcatctacggctactaccaggacgaggggagcggccaatgcaaggaatgtgac
atctgcgaggtgggctacggcctgatgttcccgtgcgggtacactcagaacaccgtctgt
gagaagtgccccgacgggaccttctccgacgaagccaaccacatggacccctgcttgccc
tgcaccatctgtgaggagaacgaggtcttgatcaaggagtgcaccccggtatccgatgcc
gagtgcagagatcttcacccgcgctggacggctcggaccccaaccctgatggggtctgac
agccccatgcctttcaccaaagacccgtacgataccgaaggcctcgccagcaccctcgca
gatacagtcaccaccgtcctgggtagctcccagccagttgtgagccgcggcactgccgat
aacctcatccctgtctactgctccatcctggcagccgtggtggtggggctaatagcctac
attgctttcaaaaggtggaacagctgcaaacagaacaaacagggcgccaacaaccgccct
gtcaaccagaccccctctccagaaggagagaagcttcacagcgacagcgggatctccgtg
gacagccagagccttcacgaccaacagccgccaacacagaccgcacaggtgcaggctctg
aaaggagacgggaacctctacaccagcctgccgcctaacaagcaagaggaggtggagaag
ttgctgaacagctccccggaggacacctggcgtcacctggcgggggagctgggctacaag
gaggatcacatagactccttcacgcaggaggagtgccctgtccgggccctgctctccgac
tggtccagcaaggacagcgccaccatggacgccctttattccgccctgcgccgaatccag
cggggagacattgtggagagcttgtacagcgagtcgaccgccacgtcgccggtgtga
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