Trachemys scripta elegans (red-eared slider): 117869365
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Entry
117869365 CDS
T07347
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117869365 (SNF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117869365 (SNF8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117869365 (SNF8)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
117869365 (SNF8)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117869365 (SNF8)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
RPA_interact_C
Plasmid_RAQPRD
EutK_C
DUF4896
Motif
Other DBs
NCBI-GeneID:
117869365
NCBI-ProteinID:
XP_034612053
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All DBs
Position
23:10277923..10287906
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AA seq
258 aa
AA seq
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MHRRGVGAGAIAKRKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
NPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQQVLKGRGKFAQDVSQDDLLRAIKKLKVLGSGFGIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKKGYVTVSEIKSSLKWEMERAKHVLEHLLKEGMAWLDTQAPGEPQYWLPALF
TELYSQEITPEEAKEAIP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggcggggggtgggcgcgggcgccatcgccaagaggaagctggcggaggccaaa
tacaaggagcgagggacggttctggctgaagaccaactggctcagatgtctaagcaactg
gacatgtttaagaccaacttagaagagtttgccagcaaacacaagcaagagattcgtaaa
aatccccagtttcgggtccagttccaggacatgtgtgcaaccatcggagtggatccattg
gcatctggtaaaggattctggtcagaaatgctgggagttggagacttctactatgagctg
ggtgttcagattattgaagtttgtctagctctgaagcacagaaatggaggtctcataacc
ctggaggaacttcatcagcaagtgctaaagggaagagggaagtttgcccaggatgtcagc
caggacgatctcctccgagctatcaagaagctgaaagttctgggcagtggctttgggatt
attcctgtcggagggacgtatctgatccagtctgtaccagctgaactgaacatggatcac
acagtggttttgcagctggccgagaaaaaggggtatgtaactgtcagcgagatcaagtcc
agtttaaagtgggagatggaacgtgccaagcacgtgctggaacacctgctgaaggaaggc
atggcctggcttgacacacaagctccaggggaacctcaatactggctgcctgctctcttt
acagaactttactctcaggaaatcactcccgaggaagcaaaggaggcaataccctga
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