Trachemys scripta elegans (red-eared slider): 117869417
Help
Entry
117869417 CDS
T07347
Symbol
ITGA2B
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
tst04810
Regulation of actin cytoskeleton
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117869417 (ITGA2B)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117869417 (ITGA2B)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117869417 (ITGA2B)
04810 Regulation of actin cytoskeleton
117869417 (ITGA2B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117869417 (ITGA2B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117869417 (ITGA2B)
04515 Cell adhesion molecules [BR:
tst04515
]
117869417 (ITGA2B)
04090 CD molecules [BR:
tst04090
]
117869417 (ITGA2B)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117869417 (ITGA2B)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117869417 (ITGA2B)
Cell adhesion molecules [BR:
tst04515
]
Integrins
Integrin alpha subunits
117869417 (ITGA2B)
CD molecules [BR:
tst04090
]
Proteins
117869417 (ITGA2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
OPT
RGL11_C
DctQ
Motif
Other DBs
NCBI-GeneID:
117869417
NCBI-ProteinID:
XP_034612146
LinkDB
All DBs
Position
23:2364397..2396075
Genome browser
AA seq
719 aa
AA seq
DB search
MAVASYFGHTVAVADVNGDGKDDILVGAPLYMEHRSDRKLYEVGCIYLYLQHRGPHPYRH
PWQTMTGTEVYGRFGTAIAPAGDLDQDGYVDVAVGAPFVGSGRVLIFRGYSEGLRTPASQ
VLESPFSGRAAFGFSVRGATDIDANGYPDVLVGAFGASKVAVYRAQPVVVASSQLLVPDV
LNPEEKTCTAHRTLVSCFPIQLCVGIKGKSLPERIKLAADLQLDRLKPTSGRRVWELQTH
QAGLRLELQLSREAPLTCQNLTAYLRDEADFKDKLSPIVVSLALTLAAGLGTEELGLVLY
GQTVVQEQTRIVLDCGEDNVCIPKLQLAAHTPVAQLFIGAENVVHILADATNEGEGAFEA
ELRLQLPRDAHYQKATSNVQGLEKLICNLKKENETRVVICELGNPMKSGTKIAVDVALSI
SNLEDAGDTIEFQLQLWSKNSRSPHSNVERVQIPIKVAALLDLRGNSLPATMVLPVAGWE
LVEGSRRLEDHGPRVEHVYQLHNQGPGTVSHAELRVEFPNQFQGDFLLYMMELNTEGRIN
CSSPTGLNPLGLEGQKPTASPGHNMSDQPAHRRERREADKAEAGPATLREPTLVNCSSQP
CVAVLCKVEMLERDQRAMVTVHSVLWMQSVRKRPHDQFIIQSQAWFNVSAMPYHIQPELL
PSGHATAHTEVVRVSPDAEKEIPTWWVVLAVLAGLLLLALFICALWKVRLPEQSHSRAD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcatcgtactttggtcacacggtggctgttgctgatgtaaatggcgatggg
aaggacgacatcttggtgggagcgccgctctacatggagcaccgctccgaccgcaagctc
tatgaggtggggtgcatctacctgtacctgcagcaccggggtccccacccctacagacac
ccctggcagaccatgaccggcaccgaggtctacggccgcttcggcacagccatcgctcct
gcgggggatctggaccaggacggctacgtcgatgtggcggtgggggctccgtttgtcggg
agcggccgtgtgctcatcttcagagggtacagcgaggggctccgcacgccggcctcgcag
gtcctggagagccccttctccggccgtgccgccttcggcttctccgtgcgcggcgccacc
gacatcgacgccaacgggtacccagatgtgctggttggggcgttcggcgccagcaaggtg
gctgtgtacagagcccagcccgtggtggtggccagtagccagctgttagtgccagatgtg
ctgaaccctgaggagaagacctgcactgcccacaggacccttgtcagctgcttccccatc
cagctgtgcgtgggcatcaaggggaagagcctcccagagagaataaagctggccgctgac
ctgcagctggaccggctgaagcccacgtcggggcgaagggtctgggagctgcagacacac
caggcgggcctcagactggagctgcagctatcgagggaggcgccactcacctgccagaat
ctcacagcctacctgcgggacgaggctgatttcaaggacaagctgagccccatcgtcgtg
agcctggcgctgaccctggcagctgggctgggcaccgaggagctgggcctggtgctctac
gggcagacggtggttcaggagcagacaagaatcgtgctggactgcggcgaggacaacgtc
tgcatcccaaagctacagcttgccgcccacacgcccgtggcccagctgttcatcggggcc
gagaacgtggttcacatcctggccgacgccaccaatgagggcgaaggcgccttcgaggcc
gagctgcggctgcagctgccacgcgacgcccactatcagaaagccaccagcaatgtccag
gggctggagaagttgatctgtaacctcaagaaggagaacgagacacgtgtggtgatctgc
gagctggggaaccccatgaagagcgggaccaagatcgctgtggacgtggcactcagcatc
agtaacctggaggacgctggtgacaccatcgagttccagctgcagctgtggagcaagaat
agccgcagcccccacagcaacgtggagcgggtgcagatccccatcaaggtcgccgcgctg
ctggacctgcgagggaattcgctgccagccaccatggtgctgccagtggcaggctgggaa
ctggtggagggcagccgccggctggaggaccacgggcccagggtggagcacgtctatcag
ctgcacaaccagggccctggcaccgtgagccacgcagagctgcgggtggagttcccgaac
cagttccagggcgacttcttgctgtacatgatggagctcaacacagaggggaggatcaac
tgctccagccccacaggactcaaccctctggggctggagggccagaaaccaacggcctcc
cctggccacaacatgagtgaccagcccgcccacaggcgagagcgacgggaggcagacaag
gccgaggcaggcccagccactctcagggagcccacactggtgaactgcagcagccaaccc
tgtgtggccgtgctgtgcaaggtggagatgctggagagggaccagcgggccatggtgact
gtccactccgtcctgtggatgcagagcgtcaggaagcggccccatgaccagttcatcatc
cagtcgcaggcctggttcaacgtctccgccatgccctaccacatccagcctgaactgctg
cccagcggacacgccacggcccacacagaggtggtgcgggtgagcccggatgcggagaag
gagatccccacctggtgggtggtgctggctgtgctggccgggctcctgctcctggccctc
ttcatctgcgccctgtggaaggtgaggctgccagaacagagccattcccgagcagattag
DBGET
integrated database retrieval system
