Trachemys scripta elegans (red-eared slider): 117869494
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Entry
117869494 CDS
T07347
Name
(RefSeq) junctional adhesion molecule A-like isoform X1
KO
K06089
junctional adhesion molecule 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecule (CAM) interaction
tst04517
IgSF CAM signaling
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117869494
04517 IgSF CAM signaling
117869494
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117869494
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117869494
04090 CD molecules [BR:
tst04090
]
117869494
Cell adhesion molecules [BR:
tst04515
]
Immunoglobulin superfamily
CTX family
117869494
CD molecules [BR:
tst04090
]
Proteins
117869494
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
I-set
Ig_2
V-set
Ig_VEGFR-1-like_5th
C2-set_2
VEGFR1-3_N_Ig-like
Ig_C17orf99
Ig_PDGFR_d4
Ig_6
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
117869494
NCBI-ProteinID:
XP_034612247
LinkDB
All DBs
Position
24:complement(4777321..4837467)
Genome browser
AA seq
298 aa
AA seq
DB search
MAGPGAWGRLHLLLLSVSSWSLISAQVMDKQTIQVPENKPIDLPCTAYVSQSGTPRVEWK
FEKGSSIVLFYYDSKFTDPYKDRAKYSPTGISFSSVTRKDTGKYTCEVFWAGSGGSDQLR
KSEVDLIVQVPPSKPVAKVPTSVTIGNKAVLTCTETDGSPPPTFQWYRDNILMPSNPKIS
EKFRNSSYTIDPKTGVLTIEPVTSFDTGDYFCEAQNNVGTAQKSEAIHLEATEVNVGGIV
AAVVVLLIVLALVAFGIWFAYSRGFFSKRRGSTNKQVIYSQPSNRSDGEFKQTSSFLV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcccggggcgtggggccggctccacttactgctcctcagcgtcagctcctgg
tccttgatatccgcccaggtcatggacaaacaaaccattcaagtgcctgagaacaagcca
attgatctaccctgtactgcgtacgtatcgcaaagcggaacacccagggtcgagtggaag
tttgaaaagggctcttcaatagtgctgttctactatgattcgaaattcacagatccctac
aaagaccgtgctaaatactcacccacagggattagtttctcttcggtgactcggaaggat
acggggaagtacacctgcgaagtcttctgggccgggagcgggggcagtgaccaactaaga
aagtcagaagttgacctcatcgtccaagtgcctccctccaagcccgttgccaaggtgccc
acctcggtgacaatcggcaacaaagctgtgctgacgtgcacagaaacagatggctctcca
ccccctaccttccagtggtacagggacaacatcctgatgccctccaaccccaagatcagt
gagaaattcaggaactcctcctacacgatcgaccccaagacaggagtgctgacgattgag
cccgtaaccagcttcgacacgggggattatttttgcgaggctcagaacaacgtcgggacc
gctcagaaatcggaagccatccacttggaagccactgaagtcaacgtgggcggtattgtg
gcagctgtggtcgtgctgctaatcgtgctggcactggttgccttcggcatctggttcgcc
tacagtcgtggctttttcagcaagagaagaggcagcaccaataagcaagttatctacagc
cagccgtccaaccggagtgacggagaattcaaacagacctcgtccttcctggtgtga
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integrated database retrieval system
