Trachemys scripta elegans (red-eared slider): 117869546
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Entry
117869546 CDS
T07347
Symbol
NES
Name
(RefSeq) nestin
KO
K07609
nestin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117869546 (NES)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
117869546 (NES)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
117869546
NCBI-ProteinID:
XP_034612365
LinkDB
All DBs
Position
24:10239241..10260121
Genome browser
AA seq
1756 aa
AA seq
DB search
MEGFLAARALGEESLQMWDLNKRLEAYLARVKFLEEENELLRAEIQSAKDRPAESSWRCK
YEEELSALRATLDDAFREKHAAELTRDNLSEEIQHVKSRCQKERAAQEEAKKQLALSKKE
LEEERRAQIWLRERATQLEKEVEALVDVHEEEKAGLEQEMASFSQSLENFRAVPVAFQPV
EVEDYSKRLSEIWRGAVETYKSEVSQLESSLCQAKENLWKAVEGNRQNQLHLQQLEKELA
GLKARKGMLEESLSRQWQDQRGEAEKFQLALESLEQEKEALGVQIAHVLEERQQLMHLKM
SLGLEVATYRTLLEAESSRLQMPSAEYKLVNGFRDAKLEVSNSKLQAVTPESRRLVSWDH
RLSPTTFQKGESKTQLLRNQIDSPKLQVAAVLPKSDGPVAREFQKINSVLQSPLLKSAPA
VRDTAAPGHSIPVTLGSSHAREMIKAAEAEMVAHSFSREPFERLDSMRSAVPEPRPLGRS
DPDTERRSPAAEGGDLPASQVEAGDIGQEEECHEEARKEVEKDPSEEPPGKLSPKDSLCP
RQLVNEALEDALKEVIDRSEPAVDSGPLQADKAPNYVHSHVSAPLEEAYGLAASPSAEVL
EEGKETDSEGQMEASHSAEQLKTVKGTEATDEMDSGLEPHFEEETREAAIQEFLDVKSSA
QQDGEESGLGPSTKQNEESIPDILATEGRPEIETREEVRSWKQNESQEEDTPRSQSADMC
GETDAVWKNTERGSPLDEGGLVLTGAEGKSWEAGISGHSHLPVTEGNVEGFDHGEDDLEV
VSTEALHLSEDEERRELWSPSRENEEDNFQAEMPESEFLQAEIQATQAFPMESHPVLVVE
SPQEEQEKFEQQEMSLHETDAAVGEDGRKEMFSDRELLSIREAIFGDETVSKAEENILGD
ETLDRTRGDSEEHKAKLEEETLGHEDLHTDENSLRHENLKQEKDTLEEEVGDLQENGFEQ
DIMLANEGLENVQKLESLGREEEVEEDYQRHLPKEQEGEGKEDAAGYPEIGEAADIALQE
PAWADTIMTNTGVTENEREQIKGSLGAEMEEIMGDDDDDDAGHFIGSEHPMSHNEAEQEA
SPGTELMEEDHYSSAREHEDIQSQPAPQLGDSPSHEISDEQTEVLEEPWEKVDVAGEAEE
ELCEEPKRPENIDMASQAPGDFSESEDSLGSLEDVSPNASQKMEGMEEEELESGKRIMLE
ETLPDSTPLRFYEKEVLAEAMSNQPPPVSDNGGDSPPAPESTAVSPDDVGQLESRAAPSS
SQEKESNEEDESGPVLARTSERAEEEGGYFMVSAPSQETPCLEETEVLEDFEEIKVETSN
LTGEDPEMLMALSEVPRDERLLEAESEEEVEQESNTGKGSEGREFPLEESKPHCSDFTWE
PEKEDRFPTKASDCGSIAGGAQTESDGTLDVPEPGDVHPEDAQKVFPLTSMADLGEILLE
GELPLSQKESPDSSSPLSSEDESPNVTQSHPGSDPEVSGGLHPGQPKDPTEMNQSGMDHS
METVAKIPADVMKDSDILEIVEQALEFNQELMLGARLSELHAGDEQQTEGRIEVSDQTQE
VGRDGGMSETGVLQETVLDSSPQSKELTTSSHMWTESNANGEMNGLHGEQILNGISDLQP
LTDQNDCAKSRGHEVSSSGDEFFGKVTITQELHREEPEAFPILETMLSRSPLQTPDYEEG
HGAGEEHSKKGQVSDETDNSKFADMMQSAHMQRQDLEAQTISVPSPFGDDVFHLGPSQPL
KFQLKDDQESWSSEDD
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggagggcttcctagcagcccgagccctaggggaggaatctctccagatgtgggacctc
aacaagcgtctggaagcctacttggcccgggtcaagttcctggaagaggagaatgagctg
ctgagagcggagatccagagcgcgaaggacaggccggccgagagctcctggcggtgcaaa
tatgaggaggagctgagcgccttgagggcaactttggatgatgccttcagggagaagcac
gcggcggagctgaccagagacaacctctccgaggagatccagcatgtgaaaagccgctgc
cagaaggagcgggcggcccaggaagaagccaagaagcaactggccctgagcaagaaggag
ctggaggaggagagacgggctcagatctggctgagggaaagagccacccagctggagaag
gaagtggaggcgctggtggacgttcacgaggaggagaaagccgggctggagcaggagatg
gcgagcttctcccagagcctggagaacttccgtgccgtgccggtggctttccagcccgtg
gaggtggaggactattccaagaggctctcggagatctggaggggagcggtggagacctac
aagagtgaggtctcccagctggagagctccttgtgccaggccaaggagaatctctggaag
gcggtggaaggcaaccggcagaaccagctgcatctgcagcaactggagaaggagctggct
gggctcaaggcacggaaggggatgctggaagagagtctttccaggcagtggcaggaccag
agaggggaggccgagaagttccagctggccctcgagtctctggagcaggagaaagaggcc
ctgggagtccagattgctcacgtcctggaggagagacagcagctcatgcacctgaagatg
tccctcggtctggaggtggcaacctacaggacgctcctggaagctgagagcagcaggctg
caaatgccttcagcagagtacaaactggtcaatgggttcagagatgccaagctggaagtg
agtaacagcaaactccaagctgtgacgcccgagagcaggagactggtttcctgggaccac
cgactgagccccaccaccttccagaagggagagagcaagacacagctactgagaaaccaa
atcgattcccccaagctgcaagttgccgccgtgctccccaagagcgacggccccgttgct
agagagttccagaaaatcaactcagtccttcagtccccactcctgaaaagtgccccggcg
gtgagggataccgccgctccgggccattcaatccccgtcacgctgggctcgtcccacgcc
agggagatgatcaaagccgccgaagcagagatggtggcccactctttctcccgggagccg
ttcgagcggcttgactccatgcgctccgcagtgccggagccacggccgttgggacggtcc
gatccagacacggaacgcaggagcccggcagcagaaggtggagatctacctgcaagccag
gtggaagcaggtgacattggccaggaggaagaatgtcacgaggaagccaggaaagaggtc
gagaaagatcccagcgaagaaccacccgggaagctgtctcccaaggattcgctctgtccc
aggcaactggtcaacgaagcattggaagatgccctgaaggaagtaatagatcgctccgaa
ccagctgtggactccggccctctgcaagcagataaggccccaaattacgtgcattctcat
gtctctgctcccctggaagaggcttacgggctagctgcttctcccagtgcagaggtattg
gaagaaggaaaggagactgactctgaaggccagatggaagccagtcattcagcagagcag
ctcaagacagtcaaaggcaccgaagccacagatgaaatggacagtggcctagagccccat
tttgaagaggagaccagggaagcagccatccaggagttcctggatgtgaaaagttctgct
cagcaggacggagaagagtcagggctgggtccttccaccaagcagaatgaagaaagcatc
cctgatattctagccaccgagggaaggcctgaaatagagacccgggaggaagtgagatct
tggaagcagaatgagagtcaagaagaagacacaccaaggtcacagagcgcagacatgtgc
ggggagactgatgcagtttggaagaacacagagcggggaagtccattagatgaaggtggg
ttggttttaacgggagcagagggaaagagttgggaggctggaataagtggccacagtcac
ctacctgtcacggaagggaatgtggaagggtttgaccacggagaagacgaccttgaggtg
gtgagcacagaagcgttgcatctgtcagaagatgaggaaaggcgagagctctggagccct
tccagggagaatgaagaagacaacttccaagcagagatgccagaaagtgaatttctgcag
gcggaaatacaagcaactcaagcttttcccatggaaagtcacccagttttggttgtggaa
agcccccaagaagagcaggaaaagtttgagcagcaggaaatgtcacttcatgagactgat
gccgcagtaggagaggacgggaggaaagagatgttctccgaccgtgagctcttgagcatc
agagaggccatctttggggatgagactgtgtcaaaggctgaagaaaacatcctgggggat
gagaccctggacagaacaagaggggacagtgaagaacacaaggcaaagctggaagaggaa
actttaggacacgaggatctccacacagatgagaacagcttgagacatgaaaacttaaag
caggagaaagataccttggaggaggaggttggggatctgcaagagaacggctttgaacaa
gacattatgctggccaacgaaggtctggagaatgttcagaaactggagtccttgggcaga
gaggaagaagtggaagaagactatcaaaggcacctgccaaaggagcaggaaggggagggt
aaggaagatgcagcgggctatccggagataggggaagctgctgacattgctttgcaagaa
ccagcctgggcggacactataatgaccaacacaggagtaacagaaaatgaacgtgagcag
ataaagggcagtttgggtgcagagatggaagaaataatgggagatgatgatgatgatgat
gcaggtcactttataggcagtgagcatccaatgtcacacaacgaagcggagcaggaggcc
agccccggcacggagctgatggaagaagaccattacagcagcgcaagagagcatgaagat
atccagagccaacctgccccacagcttggagactccccaagccatgaaatcagcgatgaa
cagaccgaggtgctggaggagccttgggagaaggtagacgttgcgggtgaagctgaggaa
gaactctgcgaagaacctaagaggccggagaacatagacatggcctcccaggcaccaggt
gacttttcagaatctgaggactccctgggatccctggaggatgtctcccccaatgcctcc
cagaaaatggaagggatggaggaggaggaattggaaagcggcaagaggattatgttggag
gaaacgctgccagatagcacacccctgcgcttctatgaaaaggaggtgctggctgaggcc
atgtccaaccaaccacctccagtaagtgataacggtggagattcaccaccagcccctgaa
agcactgcagtttccccagatgacgtaggacagctagagagcagggctgcaccatcaagc
tcccaagagaaggaaagcaatgaggaggatgaatctggcccggtgttggcaagaacatca
gagcgcgcagaggaagaaggaggttatttcatggtttcggcacccagccaagagacaccc
tgtctggaggaaactgaggttttggaggacttcgaagaaatcaaggtcgaaacatcaaat
ctcaccggagaagatccagaaatgctcatggcgctgtctgaagtgccaagggatgagaga
ctcttggaagctgaatcggaggaggaggtggaacaggagagcaacacgggcaaaggaagc
gagggtagagagtttcctctagaggagagcaagccccactgctcggatttcacctgggag
ccagaaaaggaggatcgtttcccaaccaaagcaagcgactgcggtagcattgcaggtggt
gctcaaacagagagcgacggaacgttggatgttcccgagcctggtgacgtacaccctgaa
gatgctcagaaggtttttccgttgaccagcatggctgacctaggagagatcctgttggaa
ggggaactgcctcttagccagaaagaaagtccagattctagcagccctctctcctcggag
gatgagtcacccaatgtcacccaatcccatccgggttctgatccagaggtcagcggagga
cttcaccccgggcagccaaaggatcctacagagatgaatcaaagtggcatggaccactcc
atggagacggtagcaaagattccggcagatgtcatgaaagactcggacatcctggagatt
gtagagcaagctctggagtttaaccaagagctgatgctgggcgcgaggctttcggagctg
cacgctggagatgaacagcagactgaaggcaggattgaggtgtcagaccagacccaggag
gtggggagagacggtggcatgagtgagacaggggttctgcaggagactgtcctggactcc
tcaccacaatccaaggaactgacgacgtccagccacatgtggacggagagcaatgccaac
ggagaaatgaatgggctgcatggagagcagatattgaatgggatctcagacctgcagcca
ctcaccgatcagaacgactgtgcaaaatccagagggcacgaggtgagctcttctggggat
gaattctttgggaaggtcaccatcacccaggaattacacagagaggaaccagaggccttc
cccatcttggaaacgatgctaagtcggagccccttgcaaacgccagactacgaagaaggc
cacggagctggagaagaacactccaagaaaggccaggtctccgacgaaaccgacaacagc
aaattcgctgacatgatgcagagtgctcacatgcaaagacaggaccttgaggctcagacc
atctctgtcccatcccctttcggagacgatgtctttcatctgggacccagccagcctctg
aaattccagctcaaagatgaccaggaatcgtggtcttcagaagatgactga
DBGET
integrated database retrieval system
