Trachemys scripta elegans (red-eared slider): 117869597
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Entry
117869597 CDS
T07347
Name
(RefSeq) signaling lymphocytic activation molecule-like
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tst04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117869597
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117869597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117869597
04090 CD molecules [BR:
tst04090
]
117869597
Cell adhesion molecules [BR:
tst04515
]
Immunoglobulin superfamily
SLAM/CD2 family
117869597
CD molecules [BR:
tst04090
]
Proteins
117869597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
SLAM
PKD
I-set
Ig_3
Ig_2
Ig_CD22
Receptor_2B4
DUF1841
Motif
Other DBs
NCBI-GeneID:
117869597
NCBI-ProteinID:
XP_034612459
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All DBs
Position
24:11232067..11255528
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AA seq
349 aa
AA seq
DB search
MCREMDCSECILLIISFCCAGGTSSESETTVYGSLGGSTLLSITPKFQNFTVQFSNALWK
LSVGTKRKLIIRYSGNNYTNHMTEQIKFHPENFSLEILDTKRTDAGHYEYMVNKGSEEEF
LHLQLEVYEQVSVPDIQMVSKTLGNESCTMNLSCTVKSGDNVAYSWTCSEGNTSQHPYND
NFLHLFFPPGEGSFSCTCTARNKVSQQITRFSSSVECSNKTGGSLRNELVESIVPIAIVG
VLVFGAGVTYWLRHRGQEDHCQLKEEKESCTIYSQVQRVEQQKGSRPPPVVKCSECTTIY
ASATGLPPDTAQPQDPGLTTIYDSVMPTGVMSASSERISPKTLTVTGGL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcgagagatggactgcagtgaatgcattttgctgatcatttctttttgctgtgct
gggggcacaagctctgagtcagaaacaacagtctatggaagcctggggggctcaacgctg
ttgagcataacacccaaatttcagaattttactgtgcaatttagcaacgctctatggaaa
ctgtccgttggaaccaagaggaaacttatcatccgctattctggaaacaattataccaat
cacatgacggagcagatcaagtttcatcctgagaacttctccttggaaatactggacacc
aagagaacggatgcagggcactatgaatacatggtgaacaaaggctctgaggaagagttt
ttgcatctccagttggaagtgtatgagcaggtgtccgtccccgacatccagatggtcagc
aagaccttggggaacgagagctgcaccatgaacctgagctgcacggtgaagagcggggac
aacgtggcctacagctggacctgcagcgagggcaacacctcccagcacccctacaatgac
aacttcctgcacctcttcttccccccaggggagggcagcttctcttgcacgtgcaccgcc
aggaacaaagtcagccagcaaatcaccaggttcagctcctcggtggagtgtagcaacaag
acaggcggctcgctcaggaatgaactcgtggaatccatcgtgccaatagccattgtgggg
gtcctggtcttcggtgcaggggtcacatactggctgagacacagaggccaagaagatcat
tgtcagctgaaagaggaaaaggaaagttgcacaatttactcacaagtccagagagtggag
cagcagaaaggctctcgcccccctcccgtggtgaagtgctctgagtgcaccaccatctac
gcctccgccaccgggctacctccagacacggctcagccccaagatccggggctgacgacc
atttatgacagcgtgatgcccaccggtgtaatgtcagcttcatcagagagaatttctccc
aagaccctcacagtcacaggtggtctgtag
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integrated database retrieval system
