Trachemys scripta elegans (red-eared slider): 117869601
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Entry
117869601 CDS
T07347
Name
(RefSeq) LOW QUALITY PROTEIN: guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117869601
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
MpsC
Thioredoxin_5
DUF5401
Motif
Other DBs
NCBI-GeneID:
117869601
NCBI-ProteinID:
XP_034612463
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All DBs
Position
24:14715251..14725628
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AA seq
681 aa
AA seq
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MTHPPSSPLILGAAFAFAFHINPRERQKATESGKAWDVSERNASQLTNPVAMEGPVCLVG
NGADGELEVNPAALDILRGVAQPVVVVAIVGLYRTGKSYLMNSLAGKQRGFSLGSTVQSH
TKGIWMWCLPHPRRSGHTLVLLDTEGLGDVEKGDTKNDVWIFALAVLLSSTLVYNSKGTI
DQFAMEQLHFVSELTEHIKVKAQGGDDTEEDTEFVRFFPSFIWAVRDFTLELRIEEQLVT
EDQYLEHALALRKGINKKVMEFNLPRQCIRNFFPTRKCFVFVQPTSRQEMGRLDLLPTSA
LDPQFLDQTRRFCDYVFQCSHVKTVKGGIPVNGKRFGSLVQSYVGTIRSGQVPCLDNAVT
AMASIENEAALREALAHYEARMGGLRLPAELGELSAAHGTHEADALRLFMQRSFKDEEQE
FQKQLVAGITERYADILAENEAVSEQTCRALLEELSAAMQQKLSAGLYSQPGGYQAYDRD
QTQVVENYRAKPNKGVKXGHLXSQAEEVLEQFLAGKKAEAEAVLKADNLLTEAEKHVAEE
KQKAEMLEQQRKAAEEKRLQMEQLMKDQERSHQENVKQLEAKVAEELASARQEAERALQS
KLKEQEAMMQKGFAEKARLMEDEISGLRREISSASKTDFLSNLFGAIGEGLRTIASVSNF
LTSRRQLGKGTSNPSKTQRRK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccctccaagctcaccccttatactgggtgctgcttttgcttttgcttttcac
atcaaccccagagagaggcagaaagccacagagagcggcaaagcgtgggacgtgtcggag
agaaacgccagccagctaacgaaccccgtggccatggagggacccgtgtgcctggtgggg
aacggcgctgacggggagctggaggtgaaccccgcagctctggatatcctgcgcggcgtg
gcccagcccgtggtggtggtggccatcgtggggctgtaccgcaccggcaagtcgtatctc
atgaactccttggccgggaagcagagagggttctcgctgggctccacggtgcagtcgcac
accaagggcatctggatgtggtgcctgccccacccccgccggtccggccacaccctggtg
ctgctggacaccgaggggctgggcgacgtggagaagggcgacaccaagaacgacgtgtgg
atcttcgcgctggccgtgcttctcagcagcaccctggtctacaacagcaaagggaccatc
gaccagttcgccatggagcagctgcacttcgtgtcagagctgacggagcacatcaaggtg
aaggcgcagggaggggacgacacggaggaggacacggagttcgtccgcttcttccccagc
ttcatctgggccgtgcgggatttcacgctggagctgaggatcgaggagcagctggtgacg
gaggatcagtacctggagcacgcgctggccctgaggaaaggcatcaacaagaaggtgatg
gaattcaacctgccgcgtcagtgcatccgcaacttcttccccacccgcaagtgcttcgtg
tttgtccagccgacatcgcggcaggagatgggccgtctggatttgctgcccaccagtgcc
ctggacccgcagttcctggaccagacccgccggttctgtgactacgtcttccagtgctcc
cacgtcaagacggtcaaaggagggattccggtcaatgggaaaaggttcggctccttagtg
cagagctacgtgggcaccatccgcagcgggcaggtgccctgcctggacaatgcggtgacc
gccatggcctccatcgagaacgaggcagccctcagggaggcgctggctcactacgaggcc
aggatgggggggctgcggctgccggcggagctgggtgagctctcggcggcgcatgggaca
cacgaggcggacgccctgcggctcttcatgcagcgctccttcaaggacgaggagcaggag
ttccagaagcagctggtggccgggatcacggagcgatacgcagacatcctcgcagaaaac
gaggccgtttcggagcagacctgccgcgccctgctggaggagctctcggccgccatgcag
cagaaactcagcgccgggctttactcccagcccggcgggtaccaggcctatgacagggac
cagacccaggtggtggagaattaccgggccaagcccaacaaaggggtcaagganggccat
ctctgatcccaggcggaggaggttctggagcagttcctggccggtaagaaggccgaggcg
gaggccgtgctgaaggccgacaacctgctgacggaggcggagaagcacgtggccgaggag
aagcagaaggctgagatgctggagcagcagcggaaggcggcggaggagaagcggctgcag
atggagcagctgatgaaggaccaggagcgcagccaccaggagaacgtgaagcagctggag
gccaaggtggcggaggagctggccagtgcccggcaggaggcggagcgggcactgcagagc
aagctaaaggagcaggaggccatgatgcagaagggcttcgcggagaaagccaggctgatg
gaggacgagatctcgggcctccggcgggagatcagctccgccagcaagaccgactttctg
tcaaaccttttcggcgccattggggaagggctgagaaccatcgccagcgtgtccaatttt
ctgacatccaggcgccagttggggaaggggacgagtaacccgagtaaaacccagagacga
aagtag
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