Trachemys scripta elegans (red-eared slider): 117869730
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Entry
117869730 CDS
T07347
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
tst
Trachemys scripta elegans (red-eared slider)
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KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117869730 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tst03310
]
117869730 (RORC)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117869730 (RORC)
Nuclear receptors [BR:
tst03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117869730 (RORC)
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Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7831
Motif
Other DBs
NCBI-GeneID:
117869730
NCBI-ProteinID:
XP_034612691
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Position
24:complement(6479528..6525488)
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AA seq
508 aa
AA seq
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MKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGNVTYSCTRQQNCQIDR
TSRNRCQHCRLQKCLSLGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQQQQQQQQGGEVVA
PAYSLGLANGQLKLASSPDLLESSACSTALLNGQARLSHSPDETAVLAYPNGLAKGHSRL
SDNLRGPFARDYSPERIKMESRASVFYALEMQASPDLSRLDIGGGKRGQAGGDVGETVDF
YTSPNFTSLLESPNSSVTEIEHLTQNVLKSYRETCQLRLEDLQLLRLETFSWEEVRSYQK
KSMEEMWERCACRITEAIQYVVEFAKRMGGFMELCQNDQIVLLKAGAMEVVLVRMCRAFN
SENRTVFFEGKYAGPELFKSLGCNELINSIFDFAHSLCSLHFSENEIALFTALVLINSNR
PWLQEKGKVERLQNNLELAFKHMLRKTHREGILAKLPPKGKLRSLCYQHVEKLRSFRQMY
PIIVHAVFPPLYKELFSSECELQGAVAE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacgcacacatcacaaatagaagtgatcccgtgtaagatctgcggggacaaa
tcgtcagggattcactatggggtcatcacctgtgaaggctgcaaggggtttttccgcaga
agccagcagggcaacgtgacgtactcttgcacccgccagcagaactgccagatcgaccgg
accagccgcaaccgctgccagcactgccggctgcagaaatgcctcagcctggggatgtcc
cgagacgccgtcaagttcggccgcatgtccaagaagcagcgcgacagcctccacgccgag
gtgcagaagcagctgcagcagcaacaacagcagcagcagcaaggcggcgaagtggtggcc
ccggcctactccctgggcctggctaacgggcaactcaagctggcctcctccccggacctg
ctggagtcctccgcctgctccacggccctcctgaacggacaggcgcggctgagccactct
ccggacgagacagcggttctggcctaccccaacggactggccaagggccacagccggctg
agcgacaacctgcgcggccccttcgccagggactacagccccgagcggatcaagatggag
agcagggccagcgtcttctacgccctggagatgcaggcgtcgccggacctctcccggctg
gacatcggcgggggcaagcggggccaggccgggggcgacgtcggggagaccgtcgacttc
tacacgagtcccaacttcaccagcctcctggagtcacccaattcctcggtgactgagatc
gagcacctgacccaaaacgtcctcaagtcctaccgggagacctgccagctgcgcctggaa
gacctgcagctcttgaggctggagacgttctcgtgggaggaagtcaggagctaccagaag
aagtccatggaggagatgtgggaacgctgtgcctgccgcatcacggaagccatccagtac
gtggtggagtttgccaagcggatgggcggcttcatggagctgtgccaaaatgaccagatc
gtgcttctgaaagcaggcgccatggaagtggttctggtgcgaatgtgccgtgcctttaat
tcggagaacaggacggtcttcttcgagggcaaatatgcaggccccgagctcttcaaatcg
cttgggtgcaacgagctcatcaactccatcttcgacttcgctcacagcctgtgctcgctg
cacttctccgagaatgagatcgccctcttcaccgccctggtgctcatcaactcaaatcgg
ccgtggctgcaggagaagggcaaggtggagaggctgcagaataacttggaactggccttt
aaacacatgttacggaaaacccaccgggaaggcatcctggccaagctgccgcccaaaggg
aagctgcgcagtctgtgttaccagcacgtggagaagctgcggtccttccggcagatgtac
cccatcatcgtccacgccgtgttccccccgctctacaaagagctcttcagctccgagtgc
gagctccagggagcggtggcagaatga
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