Trachemys scripta elegans (red-eared slider): 117869757
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Entry
117869757 CDS
T07347
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117869757 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
117869757
NCBI-ProteinID:
XP_034612730
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Position
24:complement(11408011..11429470)
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AA seq
712 aa
AA seq
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MAAGAGWRMGAGERGGRGAETLFRGLLFCVLGCGFCWGNSVERKIYIPLNKTAPCVRLLN
ATHQIGCQSSMSGDTGVIHVVEKEQDLKWVLTDGPHPPYMVLLEGELFTRKLMLQLKGSS
RISGLAVAISKPSPAQGFSPGLKCPNDGFGVYSNNYGPQYAHCNWTVWNPLGNGLAYEDF
NFPIFLLEDANETQVIKQCYQDHNLPQNGSVPEYPLCAMQLFAHMHAVTNTVTCMRRSSL
QTAFSLNPEEVCDALSDYNVWSTLKPINTSSKIDPMDEVIIVATRIDSHSFFWNVAPGAE
SAVASFVTHLAAAEALHKVPDVQKLPRNIMFTFFQGETFDYIGSSRMVYDMQMDKFPIRL
DNIHSFLELSQVALRNSSVLWVHTDPVSRRNESIQPQVKTLVEALINSSMGANVTLQEVS
QSQPLPPSSFQRFLRAKQIPGVVLADHRTSFQNRYYQSMYDTAENILMKYPEGLSPEETL
DYVTDTAKSLAEVATVVARALYQLAGGTSNTSAIQADPRTVSRMLYGFLIKTNNSWFQSI
IKQDLKGLLGDELPQHYIAVTTLVNTTQLVQYVLANLTGTVVNFTKEECLNPEKTPNPEK
EMYVYTWVQGSRDPNSTSRVPFCVQSTVHLTKAASPAFELKQWGSTEYSTWTESRWKDIR
ARIFLVASKELEIITLVVGIAILILSLLATYFINAKAHVLFSSPGDGGAVAY
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggccggctggagaatgggagccggggagcgaggcggccggggggcggag
accctgttccgggggctcctcttctgcgtgctgggctgcggtttctgttggggcaattct
gtagagaggaaaatctatatccccttaaacaagactgccccgtgtgttcgtcttttgaat
gccactcatcaaataggctgtcagtcctccatgagtggagacacaggggtaatccatgtg
gtggagaaggagcaggacctgaaatgggtgcttactgatggacctcatcccccatacatg
gtactgctagagggggagcttttcaccaggaagctgatgctgcagctgaagggatcctca
cgaatttctgggctggctgtggccatctccaaacccagccccgcacaaggattctcccct
ggcttaaaatgcccaaatgatgggtttggtgtctattccaataattatggccctcagtat
gctcactgcaactggactgtgtggaatcctctcgggaatggccttgcttacgaggatttc
aatttccccatctttctacttgaagatgccaacgagactcaagttattaagcagtgctac
caagaccataacctcccgcagaatggctccgtcccagagtatcctttgtgtgccatgcag
cttttcgcccacatgcatgctgtcaccaacacggttacctgcatgagacggagctccctc
cagaccgccttcagcctcaacccagaagaagtctgcgacgctctgtccgattataatgtg
tggagcacgctgaaacccatcaatacctccagcaaaatagaccctatggatgaagtcatc
attgttgctactcgaattgacagccattcattcttctggaacgtagccccaggggcagag
agcgccgtcgcctccttcgtgacccacttggcggctgctgaagccctccataaagtgcca
gatgtgcagaaactaccaaggaacatcatgttcaccttcttccaaggggagacctttgat
tacattggcagctcgcgaatggtatatgacatgcaaatggacaagtttcccatccgcctg
gacaacattcattccttcctggagctgagtcaggtggctttacggaactcctctgttctt
tgggtgcacacagaccctgtctctcggaggaatgaatctattcaaccacaggttaaaaca
ctggtggaagctctgatcaacagcagcatgggtgcgaatgtgactctacaggaggttagt
cagtctcagcctctcccgccttcttccttccagcgctttctgagggccaagcagatccct
ggggtggtcctggctgatcatcgcacttccttccagaacagatattaccagagcatgtat
gacacagcagagaacatcctgatgaaatatcctgaggggcttagccccgaggagaccctg
gactatgtcactgacacagctaagtccctggcagaagtagccacagtggtcgcccgtgct
ctctaccagcttgcggggggaaccagcaacacctctgctattcaggcggatccaagaacg
gtctccagaatgctctatgggtttctgattaaaactaacaactcctggttccagtccatc
attaaacaggacctgaaaggactcttgggcgatgaacttccccagcactacattgcggtt
accacactggtgaacaccacccagctagtgcagtacgttctggccaatctcacaggcacg
gttgtcaatttcaccaaggaggagtgcctgaaccctgaaaaaacacccaaccccgagaag
gaaatgtacgtttatacatgggtgcagggttccagggacccaaactcaacgtcgcgagtt
cccttctgtgtccagtcaactgtccatctaaccaaggccgcctctcctgccttcgagctg
aagcagtggggctccacagaatactccacgtggacagagagccgctggaaggatatccgt
gcccgcatatttctcgtagccagcaaggagctagagataatcacactggtcgtgggcatc
gccattctgatcctctctctcctcgcaacctacttcatcaacgccaaagcgcacgtgctt
ttcagcagccctggggacggtggggccgtggcttattga
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