Trachemys scripta elegans (red-eared slider): 117869864
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Entry
117869864 CDS
T07347
Name
(RefSeq) sialic acid-binding Ig-like lectin 5
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tst04090
]
117869864
04091 Lectins [BR:
tst04091
]
117869864
CD molecules [BR:
tst04090
]
Proteins
117869864
Lectins [BR:
tst04091
]
I-type lectins (Siglecs)
117869864
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
C2-set_2
Ig_2
Ig_CD22
ig
Ig_4
Motif
Other DBs
NCBI-GeneID:
117869864
NCBI-ProteinID:
XP_034612864
LinkDB
All DBs
Position
24:12495541..12568137
Genome browser
AA seq
927 aa
AA seq
DB search
MGRALLPQHDTGERELPVQGPLWRAGGPAMLRVLILTLLWRGSLSLESSYSLKVPQSVSV
QEGLCVLVPCTFTYPASFDTDNSWAQLFRNWYKDQVDVHWDLPVASSDPSRGVSQETQGR
FQLTGDLTHGNCSLQISDAQRMDAGRYFLRVEKGNFKYSYRSNYHCTHPTLEILVPELTE
EPEIQITPAWGPPGTLLAGEPVTVTCTAPGRCSGTPPRVTWMGPFSDTARNVSAPLANGT
WTHSSALSFTPAPGDHGKELICNVTYSSAQGPSTRRTIRLHIGCLSQPDAPAMGRVLPPQ
HIAREWDLPAQGPPWRVGEPSPTAATLRVLILSLLWRGSLSQQPGFTLTVPQSVSVQEGL
CVLVPCTFTYPASYDTYNPRTQLYRYWYKDSAVVGQNPPVASSDPSRWVSQETRDRFQLA
ENPAPGDCSLQISDARWTDAGRYFLRVEGRVSYNYHTSTDRTDLTLTISVTQLTEKPEIQ
ISPTWGLPGTLLAGEPVTVTCTAPGRCSGPPPQVTITGPFRNTARDASAQLANGTWARSS
ELSFTPSLGDHGKKLICSVTYRQRWGPSTSRTIWLHVGYPVRTPEITISRANRSDPQLFQ
DPSTAVGNGSQLTAREGDSLRFLCSIASSPPATLVWVRGGQAIEGAGPMEGNQLRLELPN
VKAEDRGLYGCLAQNKESTAQGTFQLLVEYSPRPGTRLNSSCQRQGPRISCSCSLRSHPP
PRLQWQVDGKPVAGNGSWGALQVSSWSQGDEAVSTLSWTGSGDRGPQIFCLGFNPHGTYG
ALHFDFSPPRRGAEKPGKLLGVGVACGLGVAVGIFLLGLCVHKLRGRELSPPSSELREMA
NESQAEHTADKASLIYSNVPTIPMDHKTPAARQTKDVQDGAAAAQAPLGPGEPDEQYYAS
INFSKPQHKGGEPPEAPDTEYSEVQRK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagccctgctgccacagcatgacaccggggaaagggagctcccagttcagggc
cccctctggagagcagggggtcctgccatgctgagggtcctgatcctcaccctgctgtgg
agggggtccctgtccctggagtctagttattccctcaaggtgccacagtcagtgtcggtg
caggaaggtctctgcgttctagtcccctgcaccttcacgtacccagcctctttcgacacc
gacaattcctgggcccagctcttcagaaactggtacaaggatcaggttgatgtgcactgg
gatctgcctgtggccagcagtgaccccagccggggggtgtcgcaggagacccaaggccgg
ttccagctgacgggggacctgacacacggaaactgctccctgcaaatcagtgatgcccaa
cggatggatgcagggagatatttccttagagtcgagaaaggaaactttaaatacagttac
cgctccaattaccattgcactcaccctacactagagatcttggtgccagagctgacggag
gagccagagatccagatcacgccggcgtgggggccaccagggacgctgctggctggggag
cctgtgactgtgacctgcacagcccccgggcgatgctccgggacccctccccgagtcacg
tggatggggcctttcagcgacacagcccggaatgtctcagctccactggcgaacggcacc
tggacccacagctccgcactcagcttcacgcctgccccgggggaccacggcaaagagctc
atctgcaacgtcacctacagctcagcacagggaccttccacccgcagaaccatccggctc
cacattggctgtctgtcccagccggacgccccagccatgggcagagtcctgccgccacag
catattgccagggaatgggatctcccggctcagggtcccccatggagagtaggggaacct
tcccccactgcggccacactgagggtcctgatcctctccctgctctggagggggtccctg
tcccagcagcccggatttaccctgacggtgccgcagtcggtgtcggtgcaggagggtctc
tgcgttcttgtcccctgcaccttcacgtacccagcctcgtatgacacctacaatccccgg
acccagctctacagatactggtacaaggattcggctgttgtgggccagaatccacctgtg
gccagcagtgaccccagccggtgggtgtcgcaggaaacccgggaccggttccagctggcg
gagaatccagcacccggcgactgctccctgcaaatcagcgacgcccgatggacagatgca
gggagatatttccttagagtcgagggaagagttagctacaattaccacaccagtaccgat
cgcactgaccttacgctcacgatctccgtgacacagctgacagagaagccagagatccag
atctcgccgacatgggggctgccagggacgctgctggctggggagccagtgactgtgacc
tgcacagcccctgggcgctgttccgggccccctccccaagtcaccattacagggccgttc
aggaacacagcccgggacgcatcagcccagctggcgaacggcacctgggcccgcagctcc
gagctcagcttcacaccctccctgggggaccacggcaaaaagctcatctgcagcgtcacc
tacaggcaaagatggggaccttccaccagcagaaccatctggctccatgtcggctatcca
gtgaggactccggaaatcaccatctccagagctaacaggagcgacccccagctattccaa
gaccccagcaccgcagtggggaacggttcacagctcacagcccgggagggcgactccctg
cggttcctctgctccatcgccagcagcccccctgccacgctggtctgggtgagggggggc
caagccattgagggagccggccccatggaggggaatcagctgcggctggagctgcccaac
gtgaaggccgaggacagggggctgtacgggtgcttggcccagaacaaggagagtactgcc
caggggacgttccagctgctcgtcgagtacagcccccggccggggaccaggctgaactcg
tcctgccagcgccaggggcccagaatcagctgcagctgctccctgcgctcccacccccca
ccccggctccagtggcaggtggacgggaagcccgtggctgggaacggctcatggggggcc
ctgcaggtcagctcctggtcccagggggatgaggctgtcagcaccctgagctggacgggg
agcggggacaggggcccccagatcttctgcctcggtttcaacccccacgggacctacggt
gccctgcactttgacttcagccccccacggagaggtgcggagaagcctggcaagctgctg
ggcgtcggggtggcctgtgggctgggggtcgctgtcggcatcttccttctcgggctctgt
gtgcacaagctgcgaggccgggagctgtcaccccccagcagtgagctcagggagatggct
aacgagagccaggccgagcacacagccgacaaggccagcctgatctacagtaacgtcccc
acaatccccatggatcacaagactccagctgcccgccagaccaaagacgtccaggatggg
gctgcagcagcccaggccccgctaggccccggggagccagatgagcagtattacgcctcc
atcaacttctccaagccgcagcacaaagggggggagcctccggaggccccggacacggaa
tattccgaggtccagcggaaatag
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