Trachemys scripta elegans (red-eared slider): 117869974
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Entry
117869974 CDS
T07347
Symbol
STAG3
Name
(RefSeq) cohesin subunit SA-3 isoform X1
KO
K13055
cohesin complex subunit SA-3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
117869974 (STAG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117869974 (STAG3)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Meiosis-specific proteins
Cohesin complex and associated proteins
117869974 (STAG3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
Cnd1
PDS5
SelA
Motif
Other DBs
NCBI-GeneID:
117869974
NCBI-ProteinID:
XP_034612972
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All DBs
Position
25:complement(7099912..7128599)
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AA seq
1014 aa
AA seq
DB search
MDTLISLLTGLSDSQVRAFRHTSTLAAMKLMTSLVRVALGVSLHKDNNQRQYEAERSKGP
SRRATDKLEALLEKRRELQEQQEEIENMMNAIFKGVFVHRYRDLVPEIRAICIEEMGNWM
QSYSASFLTDSYLKYIGWTLHDKQREVRLKCLKALQGLYRNREMAARMELFTSRFKGRMV
SMVLDKEPDVGVEAIKLLTLILQNMEEMLTDEDCEAVYPVVYASNRALAAAAGEFLYKKQ
FDLDWEAGKEKGRRGGSRDFFRLLLAFFIESELHEHAAYLVDSLWDCAAPLLKDWDGLTH
LLLEESPEEAGWGDQQENALIEILVSSMRQATEGKPPVGRGPGKKVLSARERKAQEDDRE
KLTQYLIPLLPQLLAKFSADAEKVALLLAAPRYFNLSLYSSGRLEKYLEQLLAQLREVVE
KHTGQEVLEAAARALYVLCNPEFTFYSRVDLARSRLVDTLADKFQQEVSELLQASYLDED
EVYSMAATLKRISILHNAHDLTPWQLYEPCSLLLQRAVDTGEVPKQVVIPTMTCLHFGIL
WELARVSGTVPVQKELLALKRKVASFCSLCQSCLSDVDSRVQEQAFVLLSDLLLVFSPQL
AQGEREVLELLVYRPEVALQSQLAGFLMDHVFNHAELVDSDEEDSKGKIERLHQRRNLLA
GFCKLIIYNVLELSAASDVFKHYAKFYKDYGDIIKETLSRARQIDRDEWARTLLLSLQQL
LTELLLQQGPEAVYGKAFLEIRDLARRFSVFFGLHQLHNRQALVALHKAGIKFAFQEPEP
SGSELGPLNLPFLEVLSEFSPRLLRPDKKLLLSYLEQTCQARLSPQQRGKRWNSLLMYRR
SLRSLDDMGSNASRIAAPRLRRRPSSAAKRRHLDDSSEQGDSSLPLSSRLETPMLTSTAL
KRGRQLGSPAQLQEEEGSESDFVQSQPWFSSQRSRESPGQQQQLLVPRRTSRLGLGSRMD
RLSLMEEEEMVIQAESSDEEDAQGLDMPLIRSHSSQGEQFRDLFDSTILGIEDP
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctcatctccctgctcactggcctctccgactcccaggtgcgcgccttccgt
cacaccagcaccctcgcagccatgaagctgatgacatcgctggtgagggtggcactgggc
gtgagcctgcacaaagacaacaaccagcggcagtatgaggccgagaggagcaaggggccg
agccgcagggccacggacaagttagaggcactgctggagaagcgcagggagctccaggaa
cagcaggaggagatcgagaacatgatgaacgccatcttcaaaggggtctttgtgcatcgg
tacagggatctggtgcctgagatccgggccatctgcatagaggagatggggaactggatg
cagagctacagcgcctccttcctgacagacagctacctcaaatacattggctggaccctg
cacgacaagcagcgggaggtgcggctcaagtgcctgaaggccctgcaggggctgtaccgc
aaccgggagatggctgctcgcatggagctcttcaccagccgcttcaagggtcgcatggtg
tccatggtcctggacaaagaacccgacgtgggtgtggaggccatcaagctgctgaccctg
atcctgcagaacatggaggagatgctgacagatgaggactgcgaggccgtttaccccgtg
gtgtatgcttccaaccgggcgctggctgctgctgccggggagtttctttacaagaagcag
tttgacctggattgggaagccgggaaggagaaggggcgccgtggggggagccgggacttc
ttcaggctgctgctggctttcttcatcgagagcgagctccacgagcatgcggcgtacctg
gtggacagcttgtgggactgtgctgcccccctgctgaaggactgggatggcctgacgcac
ctgctgctggaagagtccccggaggaggcaggctggggcgaccagcaggaaaacgccctg
atcgagatcctggtctccagcatgcgtcaggccacggaggggaagccgcctgttggcagg
ggccctggcaagaaggtgctctcagcgcgggagcggaaggcccaggaggacgacagggag
aaactcactcagtacctcatcccgctgctgccccagctgctggccaagttctcagctgat
gcggagaaggtggcgctcctgctggccgctccgcgctacttcaacctcagcctctacagc
agtgggcggctggagaagtacctagagcagctgctggcccagctgcgggaggtggtagag
aaacacactggccaggaggtgctggaggctgccgcccgggcgctgtacgtgctctgcaat
ccagagttcaccttctacagccgcgtggacttggcccgcagtcgccttgtggacacgctg
gctgacaagttccagcaggaggtgtctgagctcctccaggcctcgtacctggacgaagac
gaggtttacagcatggctgccacactgaagcgcatttccatcctccacaatgctcacgac
ctgaccccatggcagctctatgagccctgcagcctcctcctccagcgagctgtagacaca
ggcgaggtccccaagcaggtggtcatccccaccatgacctgtctccactttggcatcctc
tgggagctggctcgtgtctctggcaccgtccctgtgcagaaagagctgctggccctgaag
cgcaaagtcgcctccttctgctccctctgccagagctgcctgagcgatgtggactccagg
gtccaagagcaggcctttgtgctgctgagtgacctgctgctggtgttcagcccgcagctg
gctcaaggtgagcgggaggtgctggagctgctggtgtaccggcccgaggtcgccctgcag
tcccagctggccggattcctcatggatcatgtcttcaaccatgccgagctcgtggacagt
gatgaggaggacagcaaggggaagatcgagaggctacaccaacggcgcaacctgctggcc
ggtttctgcaaactcatcatctacaacgtgctggagctgagcgccgcctccgacgtcttc
aagcactacgccaagttctacaaggactacggggacatcatcaaggagacgctgagccgg
gcgcggcagattgaccgggatgagtgggcccgcacccttctcctcagcctgcagcagctg
ctgacagagctgctgctgcagcagggcccggaggcagtttacggcaaggccttcctggag
atccgggatctggcacggcgcttctccgtgttcttcggcctgcaccagctgcacaaccgc
caggcgctggtggccctgcacaaggctgggatcaaatttgccttccaggagccagaaccc
tctggttcagagctggggcccctcaacctgcccttcctggaggtgctgagcgaattctcc
ccccgcctgctgcgcccagacaagaagctgctcctgtcctacctggagcagacctgccag
gccaggctctccccacagcagagagggaagcgctggaattcactcctgatgtatcgccgc
tcgctgagatccctggatgacatgggctccaatgccagccggattgcagccccccgactc
cggaggagacctagctctgcagccaagaggaggcatctggatgattcgtctgagcaaggg
gattccagcctcccactgagcagccgcctggagacgccaatgctcacgtcgacagcgctg
aaaaggggacgccagctgggcagcccggcgcagctgcaggaagaggaggggtccgagtcg
gacttcgtgcagagccagccctggttcagctcccagcgctcccgagaatcacctggccag
cagcagcagctcctggtcccccggcgcacctcgagacttgggctgggcagcaggatggac
cggctcagcctgatggaggaggaggagatggtgatccaggcggagagcagtgacgaggag
gatgcccagggcctggacatgccgctgatccgctcgcacagctcccaaggtgagcagttc
cgggacctcttcgactccaccatccttggcatcgaggatccctga
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integrated database retrieval system
