Trachemys scripta elegans (red-eared slider): 117869995
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Entry
117869995 CDS
T07347
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117869995 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117869995 (MID1)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117869995 (MID1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117869995 (MID1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
F36G3_coil
zf-C3HC4
FN3_DSCAM-DSCAML_C
TRIM_CC
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
CCDC89
Motif
Other DBs
NCBI-GeneID:
117869995
NCBI-ProteinID:
XP_034613008
LinkDB
All DBs
Position
1:216648676..216977839
Genome browser
AA seq
706 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLNQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSSEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKGGMVEQHSRSSDAFPNLSSK
NWTKSLMQTGCHEISVSGWQNLENNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQETK
LTEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIANCKQCIERSTSLISQAEQSLK
ENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFTREKKLLECLDYLTA
PNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVP
NIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKLKTNSQPFKLDPKSAHRKLKVSH
DNLTVERDETSSKKSHTPERFTSQGSYGIAGNVFIDSGRHYWEVVISGSTWYAIGISYKT
APKHEWIGKNSASWVLCRCNNAWVVRHNSKEIPIEPAPHLRRVGILLDYDNGSLAFYDAL
NSLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHLDCTEQLP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaattgacctgccctatctgtctggagctgtttgaggaccca
ctgctgctgccttgcgctcacagcctctgtttcaactgtgcgcatcgcatattggtctcc
cactgtgccaccaacgaatcagtggaatccatcactgccttccagtgccctacttgtcgt
tatgtcatcactctcaatcaacgtggtctagacggactgaagcgcaacgtcaccctgcag
aatattatcgacaggtttcagaaagcttcagtgagtgggcccaattctcctagcgaaacc
cgccgagagcgggcatttgatagcaacagcatgtcatccagtgaaaaagttctctgccag
ttctgtgaccaggaccctgcccaggaagcagtgaagacctgtgtcacttgtgaggtgtcc
tactgcgaggagtgcctgaaagcgactcacccgaacaagaagccattcacgggccaccgt
ttgatagagcctattccggactctcacatccgaggattaatgtgtctggagcatgaagac
gagaaagttaacatgtactgcgtgactgatgaccagttaatctgtgccttgtgtaaactg
gttggacggcatcgtgatcatcaggtggcagctttgagtgagcgctatgacaaattaaag
gggggaatggtggagcagcactccagaagttcagatgctttcccaaacctctcgtctaaa
aactggactaaaagtctcatgcaaacaggatgtcatgagatttctgtttctggctggcaa
aatttggagaataacctcacaaaccttattaagaggaatactgaactggaaactctcttg
gctaaactcattcagacctgccaacatgtggaagtgaatgcatcgcgacaagaaaccaag
ctgacagaggaatgtgacctgctcattgaaataatccaacagagacgacaaattattgga
accaaaataaaggaagggaaggtggtgagactgagaaaactggctcagcagattgcaaac
tgcaaacagtgcattgaacgctctacgtctctcatctctcaggccgaacagtctctgaag
gagaatgatcatgcgcgcttcctgcagacggctaaaaatatcactgagagggtctccatg
gctactgcatcctcccaggtgttaatccctgaaattaatctcaatgatactttcgatact
tttgcgcttgattttaccagggagaaaaaattgctggaatgcctcgattatcttacagct
cctaaccctccaaccattagagaagagctctgtacagcttcttacgacacaatcactgtc
cactggacgtcagatgatgagttcagtgtggtctcatatgagctgcaatatactatcttt
actggacaagctaatgtagttagtttatgcaactcagccgacagttggatgattgttcca
aatatcaaacaaaaccactacacagtgcatgggttacagagtggcactaagtacatcttc
attgtcaaggccattaatcaggcgggcagccgaaacagtgagcctggcaagttgaagaca
aacagccagccatttaaactggatcccaagtctgcccacagaaagttgaaggtgtcccat
gataacctgacagtggagcgtgatgaaacctcttccaaaaagagccacacacccgagcga
ttcaccagccaagggagctatggaatagctggaaatgtgtttattgacagtggacggcat
tactgggaagtggttataagtgggagtacatggtatgcaattggtatttcttacaagaca
gcgccaaaacacgagtggattggaaagaattctgcctcttgggtgctttgccgttgtaat
aatgcctgggtggtgagacataacagcaaagaaattcctatagagcctgctcctcacctc
cgtcgtgttgggattttgctggactacgacaacggttcccttgccttttatgatgctttg
aactctctacacctttacacgtttgacataacctttgcacagcccgtgtgccccacattc
actgtgtggaataaatgtttgacaattataactggcctgcctatcccggatcacttagac
tgcactgagcagcttccgtga
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integrated database retrieval system
