KEGG   Trachemys scripta elegans (red-eared slider): 117870106
Entry
117870106         CDS       T07347                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tst03400]
    117870106 (PER1)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    117870106 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS BRX_N
Other DBs
NCBI-GeneID: 117870106
NCBI-ProteinID: XP_034613189
LinkDB
Position
25:5814225..5835771
AA seq 1199 aa
MSTGCEPGQTPFEGASVGGAGSGAPRRTRAQGRATDDMDANSNGSSGTESRGRDSLRSDR
SSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSTSSEQDNPSTSGCSSEQSARV
KTQKELMKALKEMKIRLPSEKRGKGQSGTLATLQYALSCVKQVQASHDYYQQWTIDENQP
CHLDVASYTIAELEGMTSEYTLKNPDTFAVAVSFVTGKILYISDQAAFVLHCKRDVFKGT
NFAEFLAPQDVSIFYGSTTPFHLPSWSACTSATAAAVDYTQEKSVFCRISGGHARGRELC
YFPFRLTPYLAKVRPADSAEGQPCCLLIAERIHSGYEAPRIPPDKRIFTTRHTPSCLFQD
VDERAAPLLGYLPQDLIGTPVLFYLHPEDRPLMLAIHKKILQHGGQPFDHSPLRFCTRNG
EYVTIDTSWSSFVNPWSRKVSFVMGRHKVRTGPLNEDVFTAPKALKMRPLEPDIQELSEQ
IHRLLLQPVHSNGSMGLCSMASNASHEQFLSAASSSDSNGLPAEETRAQRPMTFQQFCKD
VHMVKNRGQQVFIESRAKPPAAKPPCAGLETPQDGAGLGREAPCEVQRGPGQVGASEESG
QKEPSSYSYQQINCLDGIIRYLESCNIPSRVKRKCGSSSYTGSSNSDDDKQRAGREAADL
AKDAAEEMLPSRSRREEEEPAAAVGPPLAPLALPSKAESVVSLTSQCSFSSTIVHVGDKK
APESDTAMLEEGPGPAPPDREQYRRVGLTKEVLSVHTQQEEQAFLTRFQELSRLHVFDMP
PGRSRQEGPGAEPGHCGLRRGAGRRGKSKAKRVKQHKASDSTGSPPPPGPWPPSAASLPF
PAVLPVFPPRQPCAEPAPHFPAPLVAPMVALMLPNYVLPPPYFPPRLPAPPEASRSTTPE
RPNSPPFDSHCSSPLQLNLLQMEEAPKVAERQEVPGGQAGPGGGRASRTPGASELGPQKE
TCLAEGQDSSNNDALSSSSDLLDLLLQEDSRSGTGSATSGSGFMHSGSNGGSTSASGTTS
SKSSHTSKYFGSIDLSEPERAGQPPGGAGAGEQFIKYVLQDPLWLLMANTDEKVMMTYQL
PDRPAAAVLQADREKLREMQKQQPRFTEEQKKELAEVHPWVKKGLLPKAINVTACVDCGS
NPASHLAPLYDTEPHAMELSATLEPMEEGSSAPPCPDMAMEEEEAGQPARPEAGTENAG
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgagcaccggctgcgagccaggccagacgcccttcgagggggcaagtgtgggcggggcc
ggctccggagccccccggcggacccgggcccagggccgggccaccgacgacatggacgcc
aacagcaacggctccagcggcaccgagtcgcgcgggcgggactccctgcgcagcgaccgc
agcagcagcgggaacggcaaggactcagccctgctcgagaccacagagagcagcaagagc
accaactcccagagcccgtctccccctagcagctccatcgcctacagccttctgagcacc
agctccgagcaggacaacccctccaccagcggctgcagcagcgagcagtctgcgcgggtg
aagacccagaaggagctgatgaaggcgctgaaggagatgaagatccggctgccctcggag
aaacgcggcaagggccagtcgggcaccttggccaccttgcagtacgcgctgtcctgtgtc
aaacaggtccaagccagccacgactactaccagcagtggaccattgacgagaaccagccc
tgccacctggatgtggccagttacaccatcgccgagctggagggcatgacctccgagtac
accctaaagaaccctgacacgttcgccgtggccgtctcctttgtcacgggcaagatcctt
tacatctcggaccaggcggccttcgtcctgcactgcaagagggacgtcttcaaggggacc
aactttgccgagttcctcgccccccaggatgtcagcatcttctacggctccaccaccccc
ttccacctgccctcctggagcgcctgcacctcggccactgctgccgctgtggactacacc
caagagaaatcggtcttctgccggatcagtggaggccatgcccgtgggcgggagctgtgt
tacttccccttccggctcacgccttacctggccaaggtgcgccccgcagacagcgccgag
ggccagccctgctgcctgctcatcgccgagcgcatccactcgggttacgaagctccccgg
atcccgcccgataaacggatcttcaccaccagacacacccccagctgcttgttccaggac
gtggacgagagggctgcccccctgctgggttacctcccccaggacctgattggcacgccc
gtcctcttctacctgcacccggaggacaggccgctcatgctggccatccacaaaaaaatt
ctccagcacggcgggcagcccttcgaccactccccgctccgtttctgcacccgcaacggc
gagtatgtcaccatcgacaccagctggtccagcttcgtcaacccctggagtcgcaaggtc
tccttcgtcatggggcgccacaaagtgcgcacgggtccccttaacgaagacgtcttcacg
gcccccaaggcactgaagatgcggccgctggagcccgacatacaggagctctcggagcag
atccatcggctgctccttcagcctgtgcacagcaacggctccatggggctctgcagcatg
gccagcaacgcctcccacgagcagttcctgagcgcggcctcctccagcgacagcaatggc
ctccccgccgaggagacaagggcccagaggccgatgaccttccagcagttctgtaaggac
gtgcacatggtgaagaaccggggccagcaggtgtttatcgagtcccgcgccaagccgcca
gctgccaagcccccctgcgcaggcctggagacgccccaggatggcgccgggctgggcagg
gaggccccgtgtgaggtgcagcggggcccgggccaagtgggcgcttccgaggagtctggc
cagaaggagccctccagttactcctaccagcagatcaactgcctggacgggatcatccgg
tatctggaaagctgcaacatccccagccgggtgaagcggaaatgcggctcctcctcgtac
actggctcctccaactcggacgacgacaaacaacgggcaggcagggaggcggccgactta
gccaaagatgcggcggaggaaatgctgccgagccggtccaggagggaggaggaggagccc
gccgcggcggtgggacccccgctggccccgctggcgttgcccagcaaagccgaaagcgtg
gtgtccctcaccagtcagtgtagcttcagcagtaccatcgtccacgtgggagataagaaa
gccccagaatcggacacggcgatgctggaggagggccccggccccgcgccccccgaccgg
gagcagtaccgccgtgtggggctcaccaaggaggtgctgtccgtgcacacccagcaggag
gaacaggctttcctgactcgtttccaggagctcagccgcctccacgtcttcgacatgccg
cctgggcgcagccggcaggagggaccgggcgcagagccagggcactgtggcctgcggcgg
ggcgccggccggcgcggcaaatccaaggctaagcgcgtcaagcagcacaaggcgtccgac
agcaccggctccccgcctccccccggcccttggcccccctcggccgcctccctgcccttc
cccgccgtgctgcccgtcttcccgcccaggcagccctgcgccgagcccgccccccacttc
cctgcccccctggtggcccccatggtggccctgatgctccccaactacgtcctgcccccg
ccatacttccctccccgcctgcctgccccccccgaggcctcgcgctccaccacgcccgag
cggcccaactcgccccccttcgactcccactgcagctccccgctccagctcaacctgctg
cagatggaggaggcccccaaggtggccgagcggcaggaggtgcctggcggccaggccggg
ccgggaggtggcagggccagcaggacgcctggggccagcgaactcggcccacagaaagaa
acctgtctggcggaaggtcaggactcctccaacaacgacgccctgtccagctccagtgac
ctgctggacctgttgctgcaggaggactcgcgctccgggaccggctcggccacctcgggc
agcggcttcatgcacagcggctccaatggcggcagcacctcagccagcggcaccaccagc
agcaaaagcagccacaccagcaagtacttcggcagcatcgacttgtcggagccagagcgg
gcagggcagccgccgggcggggcgggggctggcgagcagttcatcaaatacgtgctacag
gaccccctctggctgctcatggccaacactgacgagaaggtcatgatgacctaccaactg
cccgaccgccccgcggccgctgtgctgcaggccgaccgggagaagctgcgggagatgcag
aagcagcagccgcgcttcacggaggagcagaagaaggagctggccgaggtgcacccttgg
gtgaagaaggggctgctgcccaaggccatcaatgtcacggcctgtgtggactgcggcagt
aacccggcctcccacctggcgcccctctacgacacggagccgcacgccatggagctgagc
gccacgctggagcccatggaggagggcagcagtgcccccccctgcccagacatggccatg
gaggaggaggaggcggggcagccggcccggcccgaggcaggcaccgagaacgctggctga

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