Trachemys scripta elegans (red-eared slider): 117870392
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Entry
117870392 CDS
T07347
Symbol
ZBED1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117870392 (ZBED1)
04121 Ubiquitin system [BR:
tst04121
]
117870392 (ZBED1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117870392 (ZBED1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117870392 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Gluconate_2-dh3
Motif
Other DBs
NCBI-GeneID:
117870392
NCBI-ProteinID:
XP_034613420
LinkDB
All DBs
Position
1:223869541..223878588
Genome browser
AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKLKPESSQQVVQDTLIMKTSHNYEN
KKHQELTSAVISLICEGMYPSSIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYNAI
REIVLKELTEILWCGISTDMWRSENQNRSYVTLAVHFLNSSPSNCLAVNSRCLKTFEVPE
ENTAETITRVLYEIFIEWGINTKVFGATTDYGKDIVKACSLLDIPVQMPCLGQTFNAGIQ
QAFQLPKLCSLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLEASEWNTIEGLVDLLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENTFRPEEKFFTVSEEPPVKKIIISSTPPPT
SAINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENTRNVSEAEPED
EDEGEWGLEQEQIFNLNDTVNVNSNFFNIRDSGFI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagcttagaaggctcgccatcagatctaaagttagtggctcatccaaga
gcaaagagtaaagtatggaagtactttgggtttgatactaatgcagaaggatgcatatta
cagtggaagaaaatctattgccgcatctgcatggcccaaattgcctattcaggaaacacg
tccaacctttcataccaccttgagaaaaatcatcctgatgagttctgcgaatttgtgaaa
agtaacactgagcaaatgagggaagcgtttgctactgcattttcaaaactgaagccagaa
tcatcacagcaggttgttcaagacactttaattatgaagaccagccacaattatgaaaac
aaaaagcatcaagaattgacttctgctgtgattagcctaatttgtgagggcatgtatcct
tcctctatagttgatgaacccacattcaaggcacttttgagaacagctgatcctagatat
gaacttcctagcaggaaatatttctgcacaaaagcaattcctgaaaaatacaatgctatt
agagaaattgttttaaaagaacttactgaaattctatggtgtggcatatccactgacatg
tggagaagtgaaaaccagaatagatcgtatgtaacacttgcagttcattttctgaatagt
agcccttctaactgtctggctgttaactcccggtgtttaaaaacgtttgaagtgccagag
gaaaatactgcagaaactattacacgagtcctttatgaaatctttattgaatgggggatc
aatacaaaagtctttggtgctacaacagattatggtaaagacattgtgaaagcttgctct
ctcctagatattccagtacaaatgccttgtttggggcagacttttaatgcaggaatacaa
caagcttttcagcttccaaaactgtgcagccttcttgccaggtgccgaaaactggtggaa
tattttcagcagtccacggtcgcaatgtacatgttaagtgagaagcagaagcaacaaaat
attctgcactgtatgcttgtaagtgatcgtgtttcctggtggggaagcacacttgccatg
ttgcaacgtcttaaagaacagcagtttgtaattgcagcagttcttgtggaggacagcaat
aaccaccatctgatgctggaagccagcgaatggaatacaattgaaggcctggtggaccta
cttcagccctttaaacaggttgctgagatgatgtctgcttcaaaatatccaacaataagt
atggtgaaacccctcctccacatgcttctaaataccacgttgaacatcaaagagaatgat
ttgaaagaaatcagcatggccaaggaagtgatagccaaagagttatcaacaacataccag
catacacctgagatagacatgtttctcaatgttgcaacttttctggaccctaggtacaaa
aaactacctttcctttcagcatttgaacggcaacaggtagaaaacagagtggtggaggaa
gcaaaaagccttttggaaaaagtaaaagaaaacactttcaggcctgaagaaaagttcttt
acagtgtcagaagagccacctgtgaaaaaaataatcatctcctctacccctccccctacc
agcgcaatcaataacatgcttgcggaaatcttttgccagacaggaggggtggaagaccaa
gaggaatggcatgctcagattgttgaggaattgagcaactttaagtcacaaaaggttctt
ggtctaaatgaagacccacttaaatggtggtctgacagactagcattatttcctgtttta
ccaaaggtacttcagaaatattggtgtattcttgccacaagagtcttccctgaacgcctt
tttggttcctctgctaatgttgtaagtgctaagagaaaccggttagccccagctcatgtt
gatgagcagatctttttgtatgaaaacactcgcaatgtgtctgaagcagaacctgaagat
gaggatgaaggcgagtggggcttggaacaggaacagatttttaatttaaatgacacagta
aatgtaaacagcaatttctttaatatccgagacagtgggttcatttaa
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integrated database retrieval system
