Trachemys scripta elegans (red-eared slider): 117870497
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Entry
117870497 CDS
T07347
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117870497 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117870497 (CNOT3)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117870497 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117870497 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
117870497
NCBI-ProteinID:
XP_034613573
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSIQVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHLEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQVS
DSAGACPCAGEWGGALATDRSLGFSPGLLGILTGCLSSVPPADILISSTTSQPPSSQPPI
QLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTP
PYHHQMPPLHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWF
QRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagaggaaattgcaaggtgagatcgatcggtgtctgaagaaggtctccgag
ggggtggagcagtttgaggatatttggcagaagctccacaatgcagccaatgccaaccag
aaggagaagtatgaagccgacctgaagaaggagatcaagaagctccagaggctgagggac
cagatcaagacgtgggtggcttcaaatgagatcaaagacaagaggcagctgatagacaac
cggaaactcattgagacgcaaatggagcggttcaaggtggtggagcgggagaccaagacc
aaagcctactccaaggaggggttgggcctggcacagaaagtcgaccctgcccagaaggag
aaggaagaggttggccagtggttaacgaacaccatcgacacgctgaacatgcaggtggat
cagtttgagagcgaggtggagtcactctctgtgcagacacgcaagaagaagggggacaag
gataagcaggaccggatcgaggggctgaagcggcacatcgaaaagcaccggtaccacatc
cgcatgctggagaccatcctccgcatgctggacaacgactccatccaggtggactcgatc
cgcaagatcaaggacgacgtggagtattacgtggactcctcgcaggaccccgacttcgag
gagaacgagtttctctacgacgacctcgacctagaagacattccgcaggctctggtagcc
acctccccgcccagccacagccacctggaggacgagatcttcaaccagtccagcagcact
cccacctccaccacctccagctcgcccattccgcccagccctgccaactgcacgacggag
aattcggaagatgacaagaagagggggcggtcgacggacagcgaggtcagtcaggtgagt
gactcggcaggcgcgtgcccttgtgctggggagtggggtggggcgttggctacggatcgg
agcttggggttttcaccaggactcctgggaatcttaacaggctgtctgtcatctgtcccc
ccagcagacattttaattagtagcacgacctcgcagccgccctccagccagccgcctatc
cagctgtcggaggtgaacatccctctctccctgggggtctgccccctgggaccggtgccc
ctcaccaaggagcagctctaccagcaggccatggaggaggcagcctggcaccacatgcct
cacccctcggactcagagaggatccggcagtacctgccccggaacccctgcccgaccccc
ccttaccaccaccagatgcctccactgcactcggacaccgtggagttctaccagcggctc
tcaacggagacgctcttcttcatcttctactatctggagggtaccaaggcgcagtacctg
gcggccaaagccctcaagaagcagtcgtggaggttccacaccaagtacatgatgtggttc
cagcggcacgaggagcccaagaccatcacggatgagtttgagcagggcacgtacatctac
ttcgactatgagaaatggggccagcggaagaaggaagggttcactttcgagtaccgctat
ctagaagaccgcgacctgcagtga
DBGET
integrated database retrieval system
