Trachemys scripta elegans (red-eared slider): 117870534
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Entry
117870534 CDS
T07347
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117870534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117870534
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117870534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
AHSP
Motif
Other DBs
NCBI-GeneID:
117870534
NCBI-ProteinID:
XP_034613620
LinkDB
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Position
1:complement(225810845..225901494)
Genome browser
AA seq
1273 aa
AA seq
DB search
MLRLEGEKNRRSGHLGRENAIHDETVPESTVQSGSCLRNGNLQTPRGKRKVQEQCARIRR
NSSRSRRPSQPQNGEVVEAVTLFEVVSMGKRAMQSVVDDWVEAYIQDRDVALLDLINFYI
QCSGCQGMVTAEMFQSLCNNDVMQKMTETFDEETGLQYKKFMAYPWILTVTWPVDMDNGD
YPLIKAGPYWKKFKANFCEFTAVLIQQCQYSILYDSYLMDTVISLLTGLADSRVRAFRHT
STLAAVKLLTALVRVNLNLDVSKCNAQRLYQVEKNRISVKRANQRLDQLERKRKEVGQYE
QKPLEIENMMNAIFKGTFLQRYRDVIPEIRAICIEEIGSWMKMYPDTFLNDSYLKYIGWM
LYDKQPEVRLKCLLGLQGIYDRKELVSKMDLFTSRFKDRIVSMTLDKDHEVAVQAMKLLM
LMSQNCEDALSSEDCETLFQFVYTTHRPLAVAAGEFLYKRLLSYQGTEEEVPPKRRGKFG
ANTCYMRKLITFFLESELHKHVTYLVDSLWDWAGSLLKDWECMTTLLLETAEEEALSDAQ
ESALIEIIVATTREAAEGHPPVGRGAGKKILSAKEKKIQLEDCTKITEHFIVVLPQLLAK
YSADAEKVANLLQIPQYYDLDVYSTGRLEKHVDALLRVVKGIVAEHSDMDVLEACSRMYY
VLCNEDLAIHRRADLARTQLIDELVDKLNELLDDSWHEGEGLCTDEEGVCRIYSTLRRIA
AFHNAHNLTKWNLYGKTSKLLVFEMEYGSLPVQMILPALQCTYFALLWQLASVVERSSSK
ETLLALNRELRFFCQICACYLSHKDKDLSEKAFMILCDLLMIVSHQSSCEDEAVGVLQYL
PSTSLQSKMLLFIQDHVFTEEKEEIKDLTEEEEREKESYKLNDLHRRRSLLAVYCKLIVF
TVVEMSAAAEIYKHYMKTYNDFGDIIKETLSRTRHNNKIQSARTLILCLQQLFQKHTETH
GSTNSMDSSFTNIKELARRFSLTFGWDQVKSRESVAMIHKEGIEFAFQGAAGVEGKCLPP
NLNFLLIISEFSNKLLKPDKRLVYSYLQRYITEPASCRGDEWHPLVWYRNSLLANEEEEN
SVISSLREWSPTSRSKTSSFKRKLSNGSLPETSHTETTNKTPDFLCTPELTAAARKSKKK
LKSQDTSLQECLPFFGPVGLSRRHSEDVIKAEDFSADGGAEDGAEDVGEDVDVVGADQVC
DGVYQPCTWPTGADQSLETAHPHSCYTGSRWRGQIKGGRTGQSGLLEEKEGRVLLAAAEK
LLTHQALGTMDSD
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtttggaaggagaaaaaaacagaagatcgggtcatcttgggagagaaaatgct
atccatgatgagactgtgcctgagtccactgtacagagtggcagctgtctgaggaatggc
aacttgcaaaccccaagaggaaaaaggaaggtccaagaacagtgtgcacgcatacgaaga
aattcttccaggagcagaaggccaagccagccacagaatggagaagtggttgaagcagtt
acattgtttgaagtggtcagcatgggcaagagggcaatgcagtctgtggtagatgactgg
gttgaagcttatatccaagatcgagatgtggcacttctagatctgatcaacttctacatt
cagtgctcaggctgtcaaggaatggtgacagctgagatgttccaaagtttgtgcaacaat
gatgtaatgcaaaaaatgacggagacatttgatgaggaaacaggattgcaatacaagaaa
tttatggcctatccctggattctgactgttacttggccagtggacatggacaatggagac
tatccactcatcaaagcgggaccctactggaagaagttcaaggccaatttctgtgagttc
actgcagtgttaatccagcagtgccagtacagcatcctctatgatagttacttgatggac
acagtcatctcactgcttacagggctagcagactccagggtcagagcattcaggcacacc
agcactttggcagcggtgaagcttctgacagcacttgtaagagtaaatctaaatcttgat
gtcagcaaatgtaacgctcagaggctgtatcaagtggagaagaacaggatttctgtcaag
agggccaatcagagactggaccaattagagagaaaaaggaaagaagtgggtcagtatgaa
cagaaaccgctggaaatagaaaatatgatgaatgctattttcaaagggacattcttacag
agatatcgtgatgtgattcctgagatccgggctatctgcattgaagaaattggcagctgg
atgaaaatgtaccctgatacattcttaaatgatagttacttgaaatatattggatggatg
ctgtatgataagcagcctgaagtgcggttgaagtgtcttctgggactgcaaggaatttat
gacagaaaagagctggtatccaaaatggatctctttactagcagattcaaggatcgaatt
gtgtccatgactctggacaaggaccatgaagtagcagttcaagccatgaaactcttgatg
cttatgtcacagaactgtgaggacgcgttatcatctgaagactgtgaaaccttattccag
tttgtttataccacgcacagacctctagcagtagcagctggggaattcctttataaaagg
ctgcttagttatcagggaactgaagaggaagtcccacccaaaagaagagggaagtttggg
gctaatacctgctacatgagaaaattaataacttttttcttggagagtgagctacataaa
cacgtcacataccttgtagacagcctgtgggattgggcaggcagtttgctgaaggactgg
gagtgcatgaccactcttttattggaaactgctgaagaagaagcattgagtgatgcccag
gaaagcgctctcattgaaataatcgtagcgaccactcgagaagctgctgaaggtcaccct
cctgtgggcagaggagcaggcaagaagatcctgtcagcgaaagagaagaaaatacaattg
gaagattgtaccaaaattactgagcactttattgtggtgcttcctcagctcttggcaaag
tattcagcagatgctgaaaaagtggcgaacctcctgcaaattccccagtattatgattta
gatgtttacagtactggacgtctggagaagcacgtagatgctttgctgagagtggtgaaa
ggcattgtagccgaacactctgacatggatgtcctcgaggcttgctccaggatgtattat
gtcctctgcaatgaagatctggccatccacaggagggcggatcttgccagaactcagctg
atagacgaattggtggacaaacttaatgagctgctggatgattcttggcatgagggagaa
ggtctttgcacagatgaagaaggagtttgccgaatatattccactttgagaagaatagca
gcttttcataatgctcacaatctcaccaaatggaatctctatgggaagacttcaaagctg
ctggtttttgagatggagtatgggagtttacctgttcagatgatcctaccagctctacag
tgcacatactttgctctcttatggcagctagcttcagttgtggagaggtcatcttccaag
gagactctcttggcattgaacagagagttgagatttttctgccagatttgtgcatgctac
ctcagccataaagataaagatttaagtgaaaaggccttcatgatactctgtgatttactg
atgattgtgagtcaccaatcttcatgtgaagatgaagctgtaggagtccttcagtatctt
cccagcacatcccttcagtcaaaaatgctcttgtttatccaggatcatgttttcacagag
gagaaagaagaaatcaaagatttgacagaagaggaggagagggaaaaggagagctacaaa
ttgaatgatttgcacaggaggcggagtcttcttgcagtctattgcaagctaattgtgttt
accgtggtggagatgtctgcggctgctgagatttataagcactatatgaagacctacaat
gattttggagatataattaaagaaaccctgagcaggacgaggcataacaacaaaatccag
agtgccaggacgttgattctctgcctgcagcagctgtttcagaaacatacagaaacccat
ggtagtaccaacagcatggattcttctttcacgaacattaaagaacttgctcgtcgcttt
tcactgacatttggctgggatcaggtgaaatccagagaatcagtagccatgatacacaaa
gaagggattgaatttgcctttcaaggagctgctggagtggaagggaaatgcctgcctcca
aatttaaactttctgttaatcatcagtgaattctccaataagctactaaagcctgacaaa
agattagtgtacagttacctgcagaggtatataacagagccagcatcttgcagaggagat
gaatggcacccattagtgtggtacaggaactctttgctggccaatgaagaggaggagaat
tctgttatcagcagtttaagagaatggtcacccacaagcagatctaagacatcttctttt
aaaaggaaactgtcgaatgggtccctgcctgaaaccagccacactgagacaacaaacaag
actccagacttcctgtgcactccagaactcactgctgcagcaaggaaaagcaaaaagaag
ttaaagtctcaagatacaagtctccaagaatgtctgccattctttggtccagtgggactg
agcagaagacatagcgaagatgtgatcaaggcagaagacttctcagcagatggtggagca
gaagacggagcagaagatgtaggcgaagatgtggatgttgttggcgcagaccaggtatgt
gatggggtgtatcaaccctgtacatggccaacaggtgctgaccaatcactggagaccgca
caccctcactcctgttacacaggctccaggtggaggggacagataaaaggaggccgcaca
ggtcagtcggggctgctggaagagaaggaaggacgtgtgctgctggctgctgcagagaaa
ctgttgactcaccaggctcttgggaccatggactcagactag
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