Trachemys scripta elegans (red-eared slider): 117870577
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Entry
117870577 CDS
T07347
Symbol
PRF1
Name
(RefSeq) perforin-1
KO
K07818
perforin 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117870577 (PRF1)
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Paralog
GFIT
Motif
Pfam:
MACPF
C2
EGF_PRF1
Laminin_B
Band_7_1
TRIC
Motif
Other DBs
NCBI-GeneID:
117870577
NCBI-ProteinID:
XP_034613664
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MPRPSSFSCLLLLILLPRVSTHCHTGTAEECEEHTAFVPGHNLAGEGIDVTTLGRKGAYL
VDSSHWQHQDGTCTLCRNSLLEGQLQRLPLAAADWREKVSCRRKLSSTVKESAMGVVRAA
GAVVQNDWKVGLEVEVKPSANTQVTLAGSHSKLAEFSTEKSQQDKYSFTSHEVSCTYYTF
RVTHKPPLTSHFTRALRDLPEDYTRSSRLEYRQLINTYGTHYVSQLQLGGRVRDVTAVRV
CEAALDGVTADEVKDCLSLEASVSIGAGKGKAEAAFSQCEEQKKKKNFKRSFHETYSERH
TEVTGGNNHADLLFSEGQDAELFSAWMESLKASPGLVSYSLRPIHNLVGQDNPKREALRQ
AVSEYIAERALWRNCTHSCPPGTRRSAHDPCSCVCPGDGSTNTMCCSRERGQGKLTVTVE
RASGLWGDYTSHTDAYVKVFFQDREVRTTTVWNTDNPVWAVHLDLGHVRVAETSQLRLQV
WDEDNKYDDDLLGTCDEPLRSGEGRHQVCYLNHGRLDFRYSLVCGPSLGGPHCLDYVPQG
PGNYKAAQD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcccagacccagctccttctcctgcctcctcctcctcattctccttcctagggtctcc
acccattgtcacacgggcacagctgaggagtgcgaggagcacacagctttcgttcctggg
cacaatctcgcaggagagggcatcgacgtgaccacgctgggtaggaaaggggcctacttg
gtggacagcagccactggcagcaccaggatgggacctgcaccctgtgccggaactcgctg
ctggaggggcagctgcagaggctgcccctggccgcggcggactggagggagaaggtctcg
tgccgcaggaagctctccagcaccgtgaaggagtcggccatgggcgtggtccgcgcggcg
ggcgccgtggtacagaacgactggaaggtggggctggaggtggaggtgaagcccagcgcc
aacacccaggtgacgctggccggctcgcactccaaactggcagagttcagcacggagaag
tctcagcaagacaagtacagcttcaccagccacgaggtgtcctgcacatactatacgttc
cgcgttacccacaaacctccgctcaccagccatttcacccgggccttgagagacctcccg
gaggattacacccgcagctcgcgtctcgagtaccgtcagttgatcaacacgtacggcacc
cactacgtgtcccagctgcagctggggggcagggtgcgggatgtgacggctgtgagggtc
tgcgaggcagcgctggatggggtgacggctgatgaggtcaaggactgtctgagcctggag
gcctctgtcagcatcggggccgggaagggcaaggctgaggcggccttcagccagtgtgag
gagcagaagaagaagaagaacttcaagcggagcttccacgagacctacagcgagcgtcac
actgaggtgacaggcggcaacaaccacgccgacctgctgttctctgaggggcaggacgcc
gagcttttctcagcctggatggagagcctcaaagccagccccggcctggtgtcctactcg
ctacgccccatccacaacttggtggggcaggacaaccccaagcgggaggcactgaggcag
gcggtgagcgagtacatcgccgagagggccctgtggaggaattgcacccacagctgcccg
ccggggacccggcgcagcgcccacgacccctgctcctgcgtctgccccggggacggttcc
accaacaccatgtgctgctcacgggagcgaggccaggggaagctgacagtgacggtggag
cgggccagcggcctgtggggcgactacaccagccacaccgatgcctatgtcaaggtcttc
ttccaggaccgggaggtgcggacaacaaccgtgtggaacaccgacaacccggtctgggcc
gtccacctggacctggggcacgtgcgggtggcggagaccagccagctccgcctccaagtc
tgggacgaggacaacaagtacgacgacgacctactggggacgtgcgacgagccgctgcgc
tctggagagggtcgccaccaggtctgctacctgaaccacggccggctggacttccggtac
agcctggtgtgtggtcccagcctgggcgggccccactgcttggactacgtcccccagggc
cccgggaactacaaggcagcccaggattag
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