Trachemys scripta elegans (red-eared slider): 117870711
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Entry
117870711 CDS
T07347
Symbol
NPAS2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117870711 (NPAS2)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117870711 (NPAS2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
bHLH_IRO3
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
117870711
NCBI-ProteinID:
XP_034613872
LinkDB
All DBs
Position
1:231410814..231557727
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AA seq
755 aa
AA seq
DB search
MDENEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN
EVSAQTEICEIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGTIVYVSDSITPLLGHL
PCDVMDQNLLNFLPEQEHSEVYKILSSRMLMADSASSDSLKTDNDLEFYCHLLRGSLNPK
EFPTYEYIKFIGNFRSYSNVPNSTCNCFDGAVPQAYRTSLGKQVCFVATVRLATPQFLKE
MCIVEEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH
EHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHTVVSYADVRVER
RQELALEAAPSEVVSSALKDSGLGLNAELHFNALEIGVSVLNTSRTPSVSSRSSRKSSNT
PMSDPASTPTKLISESNIPSLQRTPSIQQDSSMQRLSQPVTIQFSAQFNMFQTIKEQLEQ
RTLILQANIRWQQEELHKIQEQLCLVQDSSIQMFLQQPTVSLSFSNIQQTDPQQLQQRSR
VISQQQLIPSPQLHGQIASSQPANQQMLREANVVSSQAVNMAPSAAIAQDSNQCHASPDF
SQDRQLRLLLSQPIQPMMPGSCNSRLASDISVAGRQAKYSQNQQLFQSLELQTSSSSSPI
VLMGQAVLHPRFSASQPSQTSSLQPMQLQQQQQHCYLQVQTPSPLHSEQPDPLLLPSYSQ
QQGNIGYHHTQQQPLPLASRRTSSLSESSNLPQPL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatgagaaagacagggcaaagagggcttcccgtaacaagtctgaaaagaag
agacgtgaccaattcaatgttctcatcaaagagctcagctccatgcttccaggcaacacc
cgtaaaatggacaaaactacagtgcttgaaaaagtcattggctttctgcagaaacacaat
gaagtctcagcacagacagagatttgtgaaattcaacaagactggaagccttcatttctc
agcaatgaagaattcacccagctgatgttggaggcattagatggcttcattatagcagtc
accacagatggaaccattgtatatgtttctgacagtattacacctctacttggacattta
ccctgtgacgtcatggatcagaatttgttaaatttcctcccagaacaggaacattcagaa
gtttataaaatattatcttctcgtatgcttatggcagattctgcctcatcagattcccta
aagactgacaatgatttagagttttactgtcatcttctgagaggaagtttgaacccgaag
gaatttccaacatatgaatacataaaatttataggaaattttcggtcttacagcaatgtg
cctaattccacttgtaactgctttgatggtgctgttccacaggcttatagaacatcacta
ggaaaacaagtctgttttgttgctactgttcgactggcaacacctcagtttttaaaggaa
atgtgcatagttgaagaacctttagaggaattcacttcaagacatagtctggaatggaaa
tttttatttctggatcacagagcgccgcctattataggatacttgccctttgaagtgctg
ggtacttctggctatgattattaccacatagatgacctagaactcttagcaaggtgccat
gaacacttgatgcagtttggcaagggaaagtcttgttgttaccggtttctgaccaaagga
cagcagtggatctggctgcagacccattactatatcacctaccatcagtggaactccaag
ccagagttcattgtatgcacacacaccgtagtaagttatgcagatgttcgagtggaaagg
agacaagaactggccttggaagctgcaccctcagaagttgtttcttcagcactaaaggac
agtggcttaggcttgaatgcagaactgcactttaatgcgcttgaaataggcgtctcagtt
ctcaacactagtcggacaccctctgtatcatctagaagctcacgcaaatcttccaacact
cccatgtctgaccctgcatccacaccaacaaaactgatctcagagtctaacattccctcc
ttgcaaagaacacccagcatacagcaggattcatccatgcaaagactcagtcaacctgtc
actattcagttctcggcacaatttaacatgttccagactatcaaggaacagctggagcag
cgaactctgatcctgcaggccaacattcggtggcagcaggaagagctccataaaatacag
gaacagctctgcttggtccaggattccagtatacagatgtttttacagcagccaacagtg
tccctgagctttagcaacatacagcagacagatcctcagcagctacagcagaggtcaagg
gtcatttctcagcagcagcttatccccagtcctcaacttcacgggcaaattgcatcttcc
caaccagcaaaccagcaaatgttaagagaagcaaatgtggtatcaagccaggctgtgaac
atggctccatctgctgctatagcacaggatagcaaccagtgtcatgctagtccagatttc
agccaggaccgacaactgagactgttgctcagccagcctattcagccaatgatgcctggc
tcctgtaattcaagactcgcttcagatatcagtgtggctggacgccaggctaaatattct
caaaaccaacaattgtttcaaagtctggaactgcaaacttccagcagcagttcacctata
gtgctgatgggacaggcagtgttacatccacggttttctgcatcacagccttctcagaca
tcatctctgcaacctatgcaactccagcaacagcagcagcattgctacctacaggtgcag
acaccaagtcctttacacagtgagcaacccgatcctttgctcctgccgtcctactcacag
cagcaaggaaatataggataccatcatacacagcagcagccactgccacttgcttcaaga
agaaccagtagcttgtcagaatcatcaaatctaccacagccactatga
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integrated database retrieval system
