Trachemys scripta elegans (red-eared slider): 117870753
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Entry
117870753 CDS
T07347
Symbol
EDAR
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117870753 (EDAR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
tst04050
]
117870753 (EDAR)
Cytokine receptors [BR:
tst04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117870753 (EDAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
117870753
NCBI-ProteinID:
XP_034613974
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All DBs
Position
1:complement(236228838..236336794)
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AA seq
446 aa
AA seq
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MVHLGEHKWTHVFPFLVVSLVYSANAEYSNCGENEYYNQTTGMCHDCPQCKPGEEPYMTC
GYGTKDEDYGCIPCPSEKFSKGGYQICRRHKDCEGFFRATVMTPGDTENDAECGPCLPGY
YMLENRPRNIYGMVCYSCLLAPPNTKECAGMTSGVSAIFPSTSGTNTLSPFQHAHKDLSG
QGHLATALIIAMSTIFIMAIAIVLIIMFYIVKTKPSGQACCTSHSVKTVEAQANMQEEKT
DVQENVVIFSEKEEFEKLTATPAKTVKSENDASSENERLLSRSMDSDEEAAVDKQGTPDL
CLLSLVHLTRDKSTNNKSTGIQSRRKKILDVYANVCGVAEGLSPTELPFDCLEKTSRMLS
STYNSEKAIVKTWRHLAESFGLKRDEIGGMTDGMQLFDRISTAGYSIPELLTKLVQIERL
DAVESLCADILEWAQVMPSPEPVVTS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggttcatctgggtgaacataaatggacgcatgtgtttccttttctggtggtgtcactg
gtgtactctgctaatgctgaatattctaactgcggtgaaaatgaatactataatcagacc
actggaatgtgccatgattgtccccagtgcaagccaggagaagagccttatatgacttgt
ggctatggcaccaaagatgaagactacggctgcattccttgcccgtctgaaaagttttct
aaaggaggttaccagatatgcaggcgtcacaaagattgtgagggattttttcgagccact
gtcatgacacctggtgatacagagaatgatgcagaatgtgggccttgtctccctggttac
tacatgttggaaaacagacccaggaacatctatggcatggtttgctactcatgcttgttg
gcacctcctaacaccaaggaatgtgctggcatgacctctggtgtttcagccattttccca
agtacctctggcacaaacacgctctcgccttttcagcatgcacacaaagatctttcagga
caagggcatctggctactgccctaataattgccatgtctactatattcataatggctatt
gccattgtcttgatcatcatgttttacattgtgaaaacaaaaccttctggtcaagcctgt
tgcaccagccattcagtaaaaacagtcgaagctcaagccaatatgcaagaagagaagaca
gacgtacaagaaaatgttgtgattttctcagagaaagaggagtttgaaaaactgacagca
actccagctaagactgttaaaagtgaaaatgatgcatcttctgagaatgaacgactttta
agccgaagcatggacagtgatgaagaagctgctgttgataaacaagggaccccagatctg
tgcttgttatctttagttcatctcaccagggacaaatctacaaataacaaatcaactggg
attcaaagtcgaaggaaaaagatacttgatgtgtatgcgaacgtatgtggtgttgccgaa
ggtctcagtcccacagagctgccatttgattgcctggagaagaccagcaggatgctcagc
tcaacatacaactcagaaaaagctattgtgaaaacatggcgccaccttgctgagagcttt
ggactaaagagggatgaaataggtggtatgacagatggcatgcaactcttcgaccgcatc
agcacagccggctacagtatcccagaacttctaaccaaactagtgcaaattgaacggtta
gatgctgttgagtctttgtgcgcagatattttggagtgggcacaagtgatgccttcacct
gaaccagtggttacatcctga
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