Trachemys scripta elegans (red-eared slider): 117870778
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Entry
117870778 CDS
T07347
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04140
Autophagy - animal
tst04142
Lysosome
tst04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117870778 (LAMP1)
04142 Lysosome
117870778 (LAMP1)
04140 Autophagy - animal
117870778 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117870778 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117870778 (LAMP1)
04090 CD molecules [BR:
tst04090
]
117870778 (LAMP1)
Membrane trafficking [BR:
tst04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
117870778 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
117870778 (LAMP1)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117870778 (LAMP1)
CD molecules [BR:
tst04090
]
Proteins
117870778 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp
Lamp2_2nd
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
117870778
NCBI-ProteinID:
XP_034614020
LinkDB
All DBs
Position
1:complement(238234349..238269478)
Genome browser
AA seq
418 aa
AA seq
DB search
MARIGGGRWLLLAAVLLVFLQMSSSAFEVTDQSGKVCIIANLSVSFSVEYSTKSGQQLVA
DFTLAQNAEVLANKSSCGKENASAPVLAIGFGAGHLLQMNFTKTSKLYSVDELTFLYNLS
DTTVFPNSTGGKNEVSQKTNIQADLDTRYRCFSTNRMNMSNVTITLSNVTLQAYLVNHTL
SGNETVCAADKIPTTPVAPTTTSQTPTSQAPTSPPQNPMTGKYNVTGTNGTCVLAHMGLQ
LNVTYLRKDGKTGLEVLNFVPVNTSFSGSCNHSSAFLSLTFGKTRLVFHFLLNTSTDKFF
LHGVDVTTTLPSEAKETKLEAVNSSMSELRAKLGNSYKCNAEEKLWVTDHVFVNVFDVQV
QVFKIDENKFGAVEECQLDENNMVIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatcggtggcggccgctggctgctcctggccgctgtgctgctcgtgttttta
cagatgtcctcgtcagcatttgaagtgacagatcagagtggtaaagtctgcataatagct
aatctgtcagtgtccttctcagtggaatacagcaccaagagcggtcaacagctggtagca
gatttcacacttgcacaaaatgctgaagtactggcaaacaaaagcagttgtggtaaagag
aatgcatcggctcctgtactggcgattggatttggagcaggacatttgttacaaatgaat
ttcacaaagacctcaaagctgtacagcgttgatgagctaacgttcctttacaatttgtcc
gatacaactgtgttccccaactcaactggaggaaaaaacgaggtttcgcaaaaaactaat
attcaagcagacttggacacaagatatagatgtttcagtaccaaccggatgaatatgtcg
aatgtgaccataactcttagcaatgttacgcttcaagcatatcttgtgaatcatacctta
agtggaaatgaaactgtgtgtgctgcagataagatacccactactcctgtagcccctaca
actactagccagacacctacaagccaggcaccaacctcccctccacaaaatccaatgact
gggaaatacaatgtgactggtacaaatggaacctgtgtacttgctcatatggggctgcag
cttaatgtgacgtatctaagaaaagatggaaagactggattggaggtgctgaattttgtt
cccgtgaatacatctttctctgggagctgtaaccattcctctgcctttctgagcctgact
tttgggaaaaccagacttgtattccatttcctactgaatacaagtactgataagtttttc
ctgcacggggtcgatgtgaccacaactttgccttctgaagctaaagaaacaaagctggaa
gctgttaacagcagcatgagtgagctgagagctaaactggggaactcctataagtgtaat
gcagaggagaaactttgggtcacagaccatgtctttgtcaacgtattcgatgttcaggtc
caggttttcaagatcgatgaaaacaaatttggagcagtggaagaatgtcagctggatgaa
aataacatggtgatccctataattgttggcgcagcccttgctggacttgtcctgattgtc
ttgattgcttatttgattggcagaaagagaagccatgctggatatcaaacaatctaa
DBGET
integrated database retrieval system
