Trachemys scripta elegans (red-eared slider): 117870809
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Entry
117870809 CDS
T07347
Symbol
TNFSF13B
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04060
Cytokine-cytokine receptor interaction
tst04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117870809 (TNFSF13B)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117870809 (TNFSF13B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117870809 (TNFSF13B)
04090 CD molecules [BR:
tst04090
]
117870809 (TNFSF13B)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Tumor necrosis fators
117870809 (TNFSF13B)
CD molecules [BR:
tst04090
]
Proteins
117870809 (TNFSF13B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
117870809
NCBI-ProteinID:
XP_034614072
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Position
1:complement(242532696..242546398)
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AA seq
328 aa
AA seq
DB search
MIWAFWSDILTALSFSQQLAKWITPQKETELNVPSGFSKERAEMKSVDCVHVIQQKGISS
SPPALPGAGLGRKGLLSVTFLWLAMLLSSSLAAVCLYHVLTLKAELATLRSELIYRVQAR
APLPQSQDKSKEGTVSSSSLQLSAAAARQEIRLPDSEAGEGDEERGWNAGRSRGRRSALP
TEEIMLQACLQLIADSKSNIQQKDDSSIVPWLLSFKRGTALEEQGNKILVKEAGYFFIYG
QVLYTDTTFAMGHLIQRKKAHVFGDDLSLVTLFRCIQNMPHSYPNNSCYTAGIAKLEEGD
ELQLTIPRRRAKISLDGDGTFFGAVRLL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatctgggcgttttggtcagatattttgactgcccttagtttcagccagcaactggca
aaatggattacaccccagaaggagacagagctgaatgttccctctggctttagtaaggaa
agagcagagatgaaatccgtggactgtgtgcacgtcatccaacagaagggtatctcctcc
tctcctcctgctctccctggtgctggtttgggcaggaaaggactcctctcggtcacattc
ctgtggcttgcaatgctcctgtcctcttctcttgcagcagtgtgtctttaccacgttctc
acacttaaagcagaactagcaactctccgcagcgagctgatctacagagtccaggcaaga
gctccgctaccccagtcccaggataagagtaaagagggtactgtatcctcttcttccttg
cagttatcagcagctgctgccaggcaggaaatcaggctgcctgattctgaggcaggtgaa
ggtgatgaagagagaggctggaatgcaggcagaagcagagggagaaggtctgctctgccc
acagaagaaataatgctacaggcctgtctgcaattgattgctgatagcaaaagtaacatc
caacaaaaagatgactcaagcattgttccatggcttcttagctttaaaagaggaacagct
ctggaagagcaaggaaataaaatattggtcaaagaagctggttactttttcatatatggt
caggttttatatacagatacaacatttgctatgggacatctaatacaaaggaaaaaggct
catgtatttggtgatgatctcagtttggtgacattatttcgttgtatccaaaacatgcct
cattcttatcctaataattcttgctataccgctggcattgcaaaattagaagaaggggat
gaacttcaacttacaataccacggagaagggccaaaatatcattggatggagatggcact
ttttttggtgcagttcgactcctgtga
DBGET
integrated database retrieval system
