Trachemys scripta elegans (red-eared slider): 117870842
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Entry
117870842 CDS
T07347
Symbol
IPO5
Name
(RefSeq) importin-5 isoform X1
KO
K20222
importin-5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117870842 (IPO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117870842 (IPO5)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117870842 (IPO5)
Pre-60S particles
117870842 (IPO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Importin_rep_6
Importin_rep_4
HEAT_EZ
HEAT
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Cnd1
Importin_rep_5
Thioredoxin_8
HEAT_EF3_N
CEP104-like_TOG
IBN_N
TPR_TNPO3_IPO13_3rd
RTP1_C1
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
117870842
NCBI-ProteinID:
XP_034614123
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All DBs
Position
1:complement(250421524..250505795)
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AA seq
1172 aa
AA seq
DB search
MAGALAEVLGEVLVAPDGEEVAVAALASRGVSLVGLYFGCSLSGPCAQVGASLAAFYGRF
RGEAAGAGAQRLEIVFVSAEQEQQQFYLLLGNLLSPDNTVRKQAEETYETIPGQSKITFL
LQAIRNAAAAEEARQMAAVLLRRLLSSAFEEVYPALSPDVQTAIKSELLLIIQMETQSSM
RKKICDIVAELARNLIDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQ
QQHYLEVIKRMLVQCMQDQEHPTVRMLSARAAAAFVLANEHNLPLLKHFADLLPGILQAV
NDSCYQNDDSVLKSLVEIADTVPKYLRPHLEPTLQLSLKLCGDTNLNNMQRQLALEVIVT
LSETAAAMLRRHTNIVAQAIPQMLAMMVDLEEDEDWANADELEDDDFDSNAVAGESALDR
MACGLGGKLVLPMIKEHIMQMLQNPDWKYRHAGLMALSAIGEGCHQQMEGILNEIVNFVL
LFLQDPHPRVRYAACNAVGQMATDFAPGFQKKFHEKVIAALLQTMEDQGNQRVQAHAAAA
LINFTEDCPKSLLIPYLDNLVKHLHSTMVIKLQELIQKGTKLVLEQVVTSIASVADTAEE
KFVPYYDLFMPSLKHIVENAVQKELRLLRGKTIECISLIGLAVGKEKFMQDASDVMQLLL
KTQTDFSDLEDDDPQISYMISAWARMCKILGKEFQQYLPVVMGPLMKTASIKPEVALLDT
QDMENMSDDDGWEFVNLGDQQSFGIKTAGLEEKATACQMLVCYAKELKEGFVEYTEQVVK
LMVPLLKFYFHDGVRVAAAESMPLLLDCARVRGPEYLTQMWHFMCDALIKAIGTEPDSDV
LSEIMHSFAKCIEVMGDGCLNNEHFEELGGILKGKLEEHFKNQELRQVKRQDEDYDEQVE
ESLQDEDDSDVYILTKVSDILHSIFSSYQEKVLLWFEQLLPLIVNLICPHRPWPDRQWGL
CIFDDIVEHCSPSSFKYAEYFLRPMLQSICDNSPEVRQAAAYGVGVMAQFGGESYRPFCT
EALPLLVRVIQSPDAKTKENVNATENCISAVGKIMKFKPDCVNVEEVLPHWLSWLPLHED
KEEAVHTFNYLCDLIESNNPIVLGHNNSNLPRIFSIIADGEIHEAIKHEDPCTKRLANVV
RQVQTSGGLWTECISQLNADQQAAIQELLNSA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgctggcggaggtgctgggcgaggtgctggtggccccggacggggaggag
gtggcggtagcggcgctggcctcccgcggggtctcgctggtcgggctctacttcggctgc
agcctgagcggcccctgcgcgcaggtcggcgccagcctggccgccttctacgggcgcttc
aggggggaggcggccggggccggggcgcagcggctcgagatcgtcttcgtgtcggcggag
caggagcagcagcagttctatctcctcctgggcaacctgctgagcccggacaatacggtc
cgcaaacaggccgaggaaacgtatgagactatcccaggccagtctaagatcacattcctt
ttacaagccatcaggaatgctgctgctgctgaggaggctagacaaatggcagctgtcctt
ctacgacgcctgttgtcctctgcgtttgaggaagtctatccagctctttcaccagatgtt
caaactgccatcaaaagtgaactgctgttgattattcagatggaaacacagtctagtatg
aggaaaaaaatctgtgacattgttgctgagctggccaggaatttaatagatgaggatggc
aataaccagtggccagaaggtctgaagttcttatttgattccgtcagctctcagaatgtg
ggactgcgtgaggctgctctgcatattttttggaactttcctgggatttttgggaatcaa
caacaacactatttagaggtcattaagcggatgttggttcaatgtatgcaagatcaggag
catccaacggttaggatgctgtctgcaagggctgcagctgcatttgtactcgctaatgag
cacaatcttcctcttctgaaacattttgcagacttgctacctggaatcttgcaggctgta
aatgactcctgttaccaaaatgatgactccgttctaaaatcccttgtagagattgcagat
actgttccgaaatatttacgtcctcacttagaaccaacattacaactaagcctgaagttg
tgtggagacaccaatctcaataacatgcaacgtcaactggccctggaagtaatagtgacg
ctatcagaaactgctgctgctatgctgagaagacataccaacattgttgcacaagctatt
cctcagatgttagcaatgatggttgacttagaagaagatgaagattgggcaaatgcagat
gagcttgaagatgatgattttgacagcaatgcagttgctggtgagagtgcattggacaga
atggcatgtggccttggagggaaacttgttctgcctatgattaaagaacatattatgcaa
atgctccagaatcctgattggaaatacaggcatgctggtttgatggctctgtcagctatt
ggagaaggttgtcatcaacagatggagggaattctaaatgagatagttaacttcgtttta
cttttcctccaggatcctcatccaagagtgagatacgcagcctgtaatgcagttggacaa
atggctacagactttgcccctggtttccaaaagaaattccacgagaaggtaattgcagct
cttctgcaaaccatggaagatcaaggcaaccagcgtgttcaggctcatgcagctgctgca
ctcattaactttactgaagattgtccgaaatcactgcttattccctatctggataatcta
gtgaagcatcttcattccaccatggtgattaaattgcaggagttaatacagaaaggcact
aagctggttttggaacaagttgtgacttccattgcatcagttgcagatacagcagaggag
aaatttgttccctactatgacttatttatgccctctctaaaacacattgttgagaatgct
gtacagaaggaacttagacttttaagaggaaaaactattgaatgcattagcctaattggc
cttgccgttggtaaggaaaagtttatgcaggatgcatcagatgtgatgcagctgttgctg
aagacgcagacagacttcagtgatctggaagatgatgacccccagatatcttacatgatc
tctgcatgggctagaatgtgcaaaatccttggaaaagaatttcagcagtaccttcctgtc
gtcatggggcctttaatgaagactgcgtcaattaagcctgaagttgctctactagacacc
caagatatggagaatatgagtgatgatgatggttgggaatttgtaaacctaggagaccag
caaagttttggaattaaaactgcaggccttgaagaaaaagcaactgcatgccagatgctg
gtttgctatgctaaggaattaaaagaaggatttgtggagtacacagagcaagttgtaaaa
ctgatggttcctttgttgaaattctatttccatgatggtgttcgtgtggcagcagcagaa
tcaatgcctcttctccttgactgtgctagagttcgtgggccagaatatctcacacagatg
tggcatttcatgtgtgatgcgcttatcaaagctatagggacagaacctgattcagatgta
ctttcagaaataatgcattcatttgcaaagtgcattgaggtaatgggagatggatgcctt
aacaatgaacattttgaagaacttggaggaatattgaaaggaaaactagaagagcacttt
aaaaatcaagagttaagacaggtgaaaagacaagatgaagactatgatgaacaagttgaa
gagtcattacaagatgaagatgacagtgatgtttatattctgactaaagtgtcagatatc
ttgcactcaatattcagcagctaccaggagaaagtgttgctatggtttgaacaactacta
ccactaattgtcaatttaatttgtccacataggccatggccagacagacagtgggggtta
tgcatttttgatgacatcgtagagcactgcagcccatcctcattcaaatatgctgaatac
ttcctgaggccaatgctacagtcaatatgtgacaacagcccagaagttaggcaagcagct
gcttatggtgttggagttatggcacagtttggtggggagagctatcgtcctttttgcaca
gaggcccttccattgctggtgagagttattcagtcaccagatgccaaaaccaaagagaac
gtcaatgcaacagagaactgtatttcagctgtagggaagatcatgaaattcaaacctgat
tgtgtaaatgttgaggaagtcctgccacactggttatcatggcttccactacatgaagac
aaagaagaagctgttcatactttcaattacctgtgtgacctaattgagagtaacaaccca
attgtccttggtcacaacaactctaatcttcccagaatattcagtataattgcggatggt
gaaattcatgaagcaattaagcatgaagatccatgtactaaacggttggctaatgttgtt
cgtcaagtgcagacctctggaggactatggacagaatgcatatcacagctcaatgcagac
caacaggcagctatacaggagctcctgaactccgcttga
DBGET
integrated database retrieval system
