Trachemys scripta elegans (red-eared slider): 117870859
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Entry
117870859 CDS
T07347
Symbol
GPC6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tst00535
]
117870859 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117870859 (GPC6)
Proteoglycans [BR:
tst00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117870859 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Others
117870859 (GPC6)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
117870859
NCBI-ProteinID:
XP_034614160
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Position
1:complement(252886049..253983979)
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AA seq
565 aa
AA seq
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MSSWIAAPLVALTGLLLSLSAGADVKARSCSEVRQAYSAKGFSLVNIPFQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFTEDYLECVSKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPTVKPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSSRSVPENF
NTRFRPYNPEERPTTAAGTSLDRLRTIWRTMQHGVTDIKEKLKLSKKFWSTLPYTICKDE
RVTAGMSNEEDCWNGHTKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVM
TNKLKNAYNGNDVNFQDTSDETSGSGSGSGCTDDICPTEFDFITTEAPPVDSDRREVDSS
AIQSSQSLFTLFIICIVLVLQRQWR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttggatcgcggctccgctggtggctttaaccgggctgctgctgtcactttcg
gccggggctgatgtgaaggctcggagctgcagtgaggtgcggcaggcgtatagtgccaaa
ggcttcagcctggtcaatataccctttcaggaaatagcaggggaacatttgagaatctgt
cctcaggagtatacatgctgcaccacagaaatggaggacaagttgagccaacagagcaaa
ctggagtttgaaaacttggtggaggaaacaagtcactttgtgcgcaccacctttgtgtcc
aggcacaagaagtttgatgaatttttccgagagcttttggagaatgcagaaaaatcctta
aatgatatgtttgtacgaacatatggaatgctgtacatgcagaattcagaagtgttccag
gacctcttcacagaattgaaacgatattatacaggaggcaatgtaaatttggaggagatg
ctgaatgatttctgggctcggctattggagcgaatgttccagctcataaacccccaatat
catttcactgaggactatctggagtgtgtaagcaaatacacagaccagctgaaaccattt
ggagatgtacccaggaaactgaaggttcaagtgactagagctttcattgctgcacggacc
tttgttcaggggctgactgtaggcagagaggttgcaaacagagtatccaaggtcagtcca
accccagggtgcatccgtgcactaatgaagatgttatactgcccttactgcagaggactt
cccactgtgaaaccttgcaacaactactgcctcaacgtaatgaagggctgcctagcaaat
caggccgatttggacactgagtggaatctgttcatagatgctatgctcttggtagcagag
agattagaggggccattcaacattgaatcagtcatggatcctatcgatgtcaagatttct
gaagccatcatgaacatgcaagagaacagtatgcaggtgtcagcaaaggtctttcaagga
tgtggccagcctaaaccagcacctgctttaagatcttcccgctctgttcctgagaacttc
aatacccgctttaggccatacaatcctgaggagagaccaacaacagctgctggtacaagt
ttggatagactgaggactatctggaggacaatgcaacatggtgtaacagacattaaagaa
aaactgaagctttcaaaaaagttctggtcaactttaccatatactatctgcaaggatgaa
agagtgacagctggcatgtcaaatgaagaggactgctggaatggccataccaaagctaga
tacctgcctgagattatgaatgatgggctgaccaaccagatcaacaatcccgaagtagat
gtggacatcacaaggcccgacaccttcatacggcaacaaatcatggccctaagagtcatg
actaacaaactgaagaatgcatacaatggaaatgatgtaaacttccaggatacaagtgat
gaaaccagtggctcaggaagtggaagtggttgcactgatgatatctgtccgacagagttt
gacttcatcaccacggaggcaccacctgttgactcagacaggagagaagtagactcttca
gcaatccagtctagccagtcactgtttacgttgttcatcatctgcatcgtccttgtactg
cagagacagtggagataa
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