Trachemys scripta elegans (red-eared slider): 117870861
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Entry
117870861 CDS
T07347
Symbol
SLITRK5
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117870861 (SLITRK5)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
117870861
NCBI-ProteinID:
XP_034614163
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Position
1:complement(258058011..258068310)
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AA seq
1010 aa
AA seq
DB search
MCVCRGGSAQPGRGAPCACVPSPTFPSVSPAAALLRPGGSHAAHTPNRHLYGLQQCLGPG
DFRLRVKMYACCSTITLEQDPNKKMHIWMLQTIAVALTSLVLSWAESIEYYGEICDKACP
CEEKDSILTVSCENRGIISLFEISPPRFPVYHLLLSGNLLNRLYPNQFVNYTGASILHLG
SNDIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISTIEPNAF
SKLHLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLPYLGLLQHMDKVVELQLE
ENPWNCSCELIALKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQELCPRRLISDYE
MRPQTPLSTTGYFHTTPASVNSVATSSSAVYKSPLKPPKGTRQPNKTRVRPTSRLPSKDL
GYSNYGPSIAYQTKSPVPLECPTACTCNLQISDLGLNVNCQERKIESISELQPKPYNPKK
MYLTENYIALVRRADFLDATGLDLLHLGNNRISVIQDRAFGDLTNLRRLYLNGNRIERLS
PELFYGLQSLQYLFLQYNIIRDIEAGTFESVPNLQLLFLNNNLLRSLPASIFSGLTLYRL
SLRSNHFSYLPVSGVLDQLKSLLQIDLHENPWDCTCDVVGMKLWLEQLNTGVLVDQVICE
SPKKFSQSDMRTIRSELLCPDYSDIIVSTPTPSSIQLPGGTTLFSSTVRLNSTGAAGGAA
PSGGGGGSPSSSVPLSVLILSLLLVFIMSVFVAAGLFVLVMKRRKKGQGDPASANNSDVS
SFNMQYSVYGSGHHHHPAPQQPRHPRGGGPALPKVKTPAGHVYEYIPHPLGHMCKNPIYR
SREGNAGEDYKDLHELKVTYSNHHLQQGPPPPPPPGEEEPLRSPTYSVSTIEPREELLSP
VQDADRFYRGILEPDKHSSSSLGTPGNNLPDYPKFPAAYTYTPNYDLMRPHQYLHPGAGD
SRLRETVLYSPPSTVYVEPNRNEYLELKAKLNAEPDYLEVLEKQTTFSQF
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgccgcgggggctcggcgcagcctgggcggggggcgccgtgtgcgtgcgtt
ccttctccaaccttcccgtctgtgagccccgccgccgctctccttcgcccgggcggctcg
cacgcagcgcacaccccaaacaggcatctgtatgggttgcaacaatgcttgggccctgga
gatttcaggctcagagttaaaatgtacgcttgctgctctacaataactttggaacaggac
cccaacaaaaaaatgcatatctggatgctgcagacgatagcggttgctttaacatcgcta
gtcctgtcgtgggcagaaagcatcgagtattatggggaaatctgcgataaggcgtgtcct
tgcgaggaaaaggacagcatcttaacagtgagctgtgaaaacagagggatcatcagcctt
ttcgagatcagcccaccaagattccctgtctatcacctcttgttatctgggaaccttctg
aacagactctacccaaaccagtttgttaattacactggggcttcgattttgcatttaggg
agcaatgacatacaagacatcgaaacgggggcctttcatggtctgcggggcttaaggagg
ctgcacctgaacaataacaagctggaactattaagggatgacactttccttggtctggag
agtttggagtatcttcaagtcgattataattacatcagcactattgaacccaatgctttc
agcaaactgcatttgctgcaggtgctgatcctcaatgataacctcctctccagtttgccc
aacaaccttttccgttttgtgcccttaactcacctggacttgaggggtaaccggctgaag
ctgctgccctacctgggccttttgcagcacatggataaagtggttgagctgcagctggag
gagaacccatggaattgctcttgcgagttgatcgctctgaaggattggctagacagtatc
tcctactcggctctggtgggggacgtggtttgtgaaacccctttccgcttgcacggccga
gacttggatgaagtctccaagcaggagctttgccctaggagactcatctcggattacgaa
atgcgaccgcagacaccattgagcaccacagggtatttccacactaccccggcctcggtc
aactccgtggccacctcttcctcggctgtttacaaatcccccttgaagccccctaaaggg
acccgtcaaccaaacaagaccagggtgcgtcccacctcccgcctgccctccaaagacctg
ggatacagcaattacggccccagcatcgcctaccagaccaaatccccggtgcctttggaa
tgtcccaccgcctgcacttgcaacctgcagatctccgacctgggcctcaatgtcaattgc
caggagaggaagatcgaaagtatctccgagctacagcccaaaccctacaaccccaagaag
atgtatctgaccgagaactacatcgccctggtgcgcagggcggatttcctggacgccacc
gggctagatttgttgcacctgggcaacaaccggatctcggtcattcaggaccgggccttt
ggggatctaactaatttgagaagactctacctgaacgggaaccggatcgagcgactgagc
ccggagctgttctacgggctgcagagcctgcagtacctcttcctgcagtacaacatcatc
cgggacatcgaggcgggcacctttgagtcagtccccaacctccagctcttgtttttgaac
aacaacctgctgagatctttgcccgccagcattttttccggcctgactctctacaggctg
agcctgaggagcaaccacttctcctacctgcctgtgagcggggtgctggaccagctgaaa
tccctgctgcagatcgacctgcacgagaacccctgggattgcacctgcgacgtggtgggc
atgaagctgtggctggagcagctcaacaccggggtgctggtggaccaggtcatctgcgag
tcccccaagaagttctcccagagcgacatgcggaccatcaggtcggagttgctgtgccca
gactactccgacatcatcgtctccacccctaccccttcctccatccagctgccgggcggg
accacccttttctcttccaccgtgcggctcaacagcacgggcgcggcggggggcgcggcg
ccctcgggcggcgggggcggatccccctcgtcgtcggtgccgctgtcggtgctgatcctg
agcctgctgctggtgttcatcatgtcggtgttcgtggcggcggggctcttcgtgctggta
atgaagcgccggaagaagggccagggcgacccggccagcgccaacaactccgacgtgagc
tccttcaacatgcagtacagcgtctacggcagcggccaccaccaccacccggcgccgcag
cagccccgccacccgcgcggcggcggcccggccctgcccaaggtgaagacccccgccggc
cacgtgtacgagtacatcccgcacccgctgggccacatgtgcaagaaccccatctaccgc
tcccgggagggcaacgcgggcgaggattacaaagacctgcacgagctcaaggtcacctac
agcaaccaccacttgcagcaagggccgccgcccccgccgcccccgggggaggaggagccc
ctgcggagccccacttacagcgtcagcaccatagagccccgggaggagctgctctccccg
gtgcaagacgccgatcgcttttacaggggcattttggagcccgataaacactcctcctcc
tcgctgggcacccccggcaataatctccccgattaccccaaattccccgccgcctacacc
tacacccccaactatgaccttatgcggccccatcagtacttgcaccccggggccggggac
agcaggctccgggagacggtgctctacagccccccgagtactgtctatgtagagcccaac
aggaacgagtatctggagttaaaagcaaaactaaacgcagagccggactacctcgaagtg
ctggaaaaacagaccacattcagccagttctga
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