Trachemys scripta elegans (red-eared slider): 117870863
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Entry
117870863 CDS
T07347
Symbol
SLITRK6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117870863 (SLITRK6)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LapA_dom
LRR_LRWD1
Neur_chan_memb
EphA2_TM
TMEM154
LRRNT
Motif
Other DBs
NCBI-GeneID:
117870863
NCBI-ProteinID:
XP_034614166
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Position
1:260114348..260121782
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AA seq
840 aa
AA seq
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MKLWIFMLCSVVVASDLLQSQTSLSSARGSCENLCSCEEKDDILIINCEERGIKMLSQIN
VPPSQPFHLNLLNNGLTTLHMNDFAGLINAISLHVGFNNIADIEPGAFNGLSLLKQLHIN
HNSLEILKEDTFQGLENLEFLQADNNFITVIEASAFSKLNRLKVLILNDNAIEFLPSNIF
RFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNKWACNCDLLQLKIWLENMPPQS
IIGDVVCNSPPVIKGSILRRLKKELLCPTHPINELEDPSGSLPLVVTTSISDSHLPAKVI
PVLKAPTKEPGLVLHATKPATQLPGIYCPVPCHCTSHILSGVLIHCQERNIESLSDLGPP
PPNPRKLILAGNIIQTLLKSDLVDYASLEMLHLGNNRIEILEEGSFMNLTRLQKLYLNGN
HLTKLSQSLFLGLQHLEYLYLEYNAIKEVLPGTFNMMPKLKVLYLNNNLLQTLPPHVFSG
VPLARLNLKTNQFTHLPVSTVLDELDLLVQIELEDNPWDCTCDSVGLQQWIQKLSKNIMM
GDIFCKSPGHLAKKELKSLNSEVLCPGLINSPALPTHASFIVVTTSSTTTNTADTILRSL
TDAVPLSVLILGLLIVFITIVFCAAGIVVLVLHRRRRHKKKQADEHMRDSSPVHLQYSMY
GHKTTHHTTERPAPTLYEQRMISPMVQVYRSPSFSPKQTEQQEEGNEKDMNDSRHLRRNL
LERENNSPLTGSNVKYKCTDQSAEFLTFQDASSLYRNILEKERELQQLGITEYLRKNIVQ
LQPDMEVHYPGTHEELKLMETLMYSRPRKVLLEQTKNEYFELKANLHAEPDYLEVLEQQT
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctggatttttatgttatgttcagttgtggttgcctcggatttactacaatct
cagacttctttgtcttcagcgagaggatcttgtgaaaatctgtgttcttgtgaagaaaag
gatgatatcttgattataaactgtgaagaaagaggtatcaaaatgttatcacaaataaat
gtcccaccatcacagcctttccatcttaatctgctgaacaatggcttgaccacgttacac
atgaatgattttgctggcctcatcaatgctatctcactacatgttggatttaataatatt
gcagatattgaacctggagcttttaatggtctcagtcttcttaagcaacttcatatcaat
cacaattcattagaaatacttaaagaggatacttttcagggacttgaaaatctggagttt
cttcaagcagacaacaatttcatcaccgtgattgaagcaagtgcctttagcaaactcaac
agacttaaagtgcttattttaaatgacaatgccattgagtttctcccttctaacatattt
cgctttgtaccgttgacccacttagatcttcgtggaaaccagttacagacactgccatat
gttggctttttagagcatattggtcgaatactggaccttcagctggaagacaacaaatgg
gcctgtaattgtgacttactgcagctgaagatatggcttgaaaacatgcctccccagtct
ataataggtgatgttgtgtgcaacagccctccagttatcaaaggcagcatcctaagaaga
ttaaaaaaagaattgctctgtcccactcaccctataaatgaacttgaagatccttcaggg
tccttgcccttggtagtaaccacctctataagtgatagccacctaccagccaaggtgatc
cctgtcctgaaagctcctaccaaggaaccaggtttagtgcttcatgccacaaagccagct
actcagcttccaggaatatactgtcctgtaccctgtcactgcaccagccatatcctgtca
ggagttctaattcactgccaggagcgaaatattgaaagcttgtctgatttaggtccccct
cctccaaaccctagaaagcttattctagctggaaacattattcaaacattgctgaaatca
gatctggtggactatgctagcctggaaatgcttcacttgggaaacaatcgtattgaaatc
cttgaagaaggatcatttatgaatctaacaagattgcagaagctatatctaaatggcaat
catcttacaaagttaagtcagagtctcttccttggtcttcagcaccttgagtatttgtat
cttgaatacaatgccatcaaggaagttttgccagggacatttaacatgatgccaaaactt
aaggtgttatatttaaacaacaaccttcttcaaactttaccaccccatgttttctcaggg
gtgccactagccaggctaaaccttaaaacaaaccagtttacccatttgcctgtgagcact
gtcttggatgaactggatttgttggtacaaattgaacttgaggacaacccttgggactgt
acttgtgattcagttgggctgcagcaatggatacaaaagttgagtaagaacatcatgatg
ggtgacattttctgtaaatccccagggcacctagcaaaaaaagaattgaaatctctgaac
agtgaagtcttatgcccaggactaataaatagcccagccctgccaacccatgctagcttt
atagttgtgacaacttcttctacaaccaccaatactgcagacactattcttcgatcactt
acagatgctgtcccactttctgttttaatcctagggctcctaattgtgtttattacgatt
gtattttgtgcagcaggaatagttgtccttgttctgcatcggcggagaagacacaaaaag
aaacaggcagatgaacacatgagggacagtagcccagttcatctccagtacagcatgtat
ggtcacaaaacaacacaccacacaactgagcgtccagcaccaactctctatgagcaacgc
atgatcagtcccatggttcaagtttatcgaagtccatccttcagccccaaacagacagaa
caacaggaggaaggaaatgaaaaggatatgaatgactccagacatctccgcagaaatctt
ctggaaagagagaacaattctcctctcacaggttcaaatgtcaaatacaaatgtacagac
caatcagctgaatttctgacctttcaggatgccagctccttatacagaaacattcttgag
aaagaaagagaactccagcagctagggatcactgagtatctaaggaaaaatattgtccag
ctccagcctgacatggaagtacattatcctggaacacatgaggagctaaagttaatggag
acattaatgtactccagaccaagaaaggttttgcttgagcagactaaaaatgagtatttt
gagctcaaagctaacttacatgctgagccagactacctggaagttctggaacagcaaaca
taa
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