Trachemys scripta elegans (red-eared slider): 117870890
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Entry
117870890 CDS
T07347
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117870890 (TBC1D4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117870890 (TBC1D4)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117870890 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117870890 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117870890 (TBC1D4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
DUF4249
Motif
Other DBs
NCBI-GeneID:
117870890
NCBI-ProteinID:
XP_034614234
LinkDB
All DBs
Position
1:268273429..268428138
Genome browser
AA seq
1275 aa
AA seq
DB search
MEKKGQDEPLPHPLEPEPQPQAGGRAMGEKRFKLWYVGWSCLDRRTTLPMLPWLMAEIRR
RSQRQDPSGPLGNSVPAREVLLLLGSPNLRCVPATSSGSPGSANPAVFIFEHKAQHISRF
IHNSHDLTYFAYLIKAQPDNPESQVACHVFRATDPNQVPDVISSIRQVSKAALKEDAKPG
KDSEDAFYNSQKFEVLYCGKVTVACKKAPSTLIDECIEKFSLHERQRLKLLSEQRSTDSS
SDLTLYEGDVPASPSDSPFEELDGTSTTIGNTGILTIGGQTNLAGTRVSFPERILEDSGF
EQQEFRSRCSSVTAVMQRRVHDTSLKTQPRRRHASAPSHVQPSDSEKNRTMLFQVGRFEI
NLISPDTKSVVLEKNFKDISSCSQGIQHVDHFGFICRESIEPGINQYVCYVFQCASESLV
DEVMLTLKQAFSTAAALQNAKTQIKLCEACPMHSLHKLCERIEGLYPPRAKLVIQRHLSS
LTDNEQADIFERVQKMKPVSDQEENELVILHLRQLCETKQKTHVHIGEAPLNISNSAIPE
NTASSGRFKLDILKNKAKKSLTSSLENIFSRGASRMRGRLGSMDSFERCSSLTSDKDCSP
GDSPPATPPASPVSSVWQPFPEEDSDSPQFRRRAHTFSHPTSSAKKRITFQDGRSQSVKS
PLLRQNSIEQSSPVPLARRRYRSESGLPSSFSAPSFLKSFYQSSGRPLQQSENDLSKSDG
EGRKRTSSVCSNESLNASGVTLTPRRISWRQRIFLRVASPMNKSPSTMQHQDGLEGNELL
PLSPLAPALEEDPLSLILQNEDAPDKAGGRKKSEELQSLWRKAIHQQILLLRMEKENQKL
EASRDELQSRKAKLDYLEVGTCQKDVINIWDKKLLNCRAKIRCDMEDIHTTLKEGVPKSR
RGEIWQFLAVQHRVRHRLPSKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSTQ
LGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQ
YRPDMLSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFPLGFVAR
VFDIIFLQGTEVIFKVALSLLSSQEALVMECESFENIVDFLKGTIPDMTKLQMEKIITQV
FEMDISKQLHAYEVEYHVLQDELQEGLNPCDDGEPLEKLERANSQLKRQNMDLLEKLQIA
HAKIQSLESNLENILSRENKMRSLIQSLEQEKMAYQKTVEQIRKYLPAEALSDCELLLKE
VNANPNNRTKQGNKP
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagggccaggacgagccgctccctcaccccttggagccggagccgcagcct
caggccggggggagggcgatgggggagaaacgcttcaagctgtggtatgtgggttggtcc
tgcctggacagacggaccacgctgcccatgctcccctggctgatggccgagatccgcagg
cgcagccagaggcaggaccctagcggacccctgggtaactcggtgcccgcccgggaggtg
ctgctgctcctgggctccccgaacctccgctgcgtccccgccacctccagcggcagcccg
ggcagcgccaacccggccgtcttcatcttcgagcacaaggcgcagcacatctcccgcttc
atccacaacagccacgacctcacctacttcgcctacctgatcaaggcgcagcccgacaac
cccgagtcgcaggtggcctgccacgtgttccgggccactgaccccaaccaggttcctgat
gtgatcagcagcataaggcaagtgtccaaagcagccctgaaagaggatgccaagcctggt
aaggatagtgaagatgccttctacaattcccaaaaatttgaggttttgtactgtggaaag
gtgactgtggcctgtaagaaagccccctccactctaattgatgagtgcattgagaaattc
agtctacacgagcgccagcgcctgaaactgttgagtgagcagcggagcacagattccagc
tcagacttaaccttgtatgaaggagacgtgccagcttctccgtcagatagtccatttgag
gagctagatggcacgagcaccaccatcgggaacactgggatccttacaattggaggccag
accaacctggctggcacccgtgtctccttccccgagcgaattttggaggattctggcttt
gagcagcaggaatttcgctcccggtgcagcagcgtcactgcagttatgcaaaggagggtt
catgataccagcctgaaaacacagccacgcaggagacatgcaagtgcacccagtcatgtt
caaccctcagactctgagaagaaccgaacaatgttatttcaggttggacgatttgaaatt
aacctcatcagcccagacaccaaatctgttgtgcttgaaaagaattttaaagatatctcc
tcatgttctcagggtatacaacatgttgatcactttggttttatttgtcgggaatctatt
gaacctgggataaaccagtatgtttgctacgtgttccagtgtgcaagtgaatctttggtt
gatgaggtaatgcttaccctgaaacaagcctttagcactgctgcagctctacagaatgcc
aagactcagattaaactgtgtgaggcctgtcctatgcactcgttgcataaactctgtgaa
agaattgaaggtctttacccacctagagccaaacttgtaattcagagacacctgtcatca
ctgactgataatgagcaagccgacatttttgaacgtgttcagaaaatgaagcctgtcagt
gaccaggaagaaaatgagcttgtgatcttacatctgcgacagttgtgtgaaacgaaacaa
aagacgcacgtccatattggcgaggcaccattgaacatttcaaacagtgcaatcccagaa
aacactgctagcagtggccggtttaaactcgacattctgaaaaacaaggccaagaaatcc
ttgactagttctctggaaaatatcttctcaaggggagctagcagaatgcgaggtcgtctg
ggcagcatggacagctttgaacggtgcagcagccttacttctgataaggactgttcaccc
ggggattctcctccggccactcctccagcttcccctgtgtcctcggtatggcagccattt
cccgaagaggactctgattctcctcagtttagaaggcgtgcacatactttcagccatcca
acgtccagtgccaagaagaggattactttccaggacgggaggtcccagagtgttaagtct
ccacttctgagacagaattctatagagcagagcagtcctgtacctttagctcgacgacga
tatcgtagtgagagtggacttccctcttccttctctgccccctctttcctgaaaagcttt
taccagagctcaggcaggccgctccagcagtcagaaaatgacctttccaagagtgatggg
gagggaaggaaaaggacctcatctgtctgcagcaatgagtctctaaatgccagtggggtc
actcttaccccccgccgcatctcctggcggcagcgaatcttcctgcgggttgcttcaccc
atgaacaaatctccctcaacaatgcagcatcaagatgggcttgaggggaatgaattgttg
ccactgtcccctcttgctccagccttggaggaggaccctctttctttgatattgcaaaat
gaggatgccccagataaggctggcgggagaaaaaaatcggaagagttgcagagtctgtgg
agaaaagctatccatcaacaaatcctactgcttcgaatggaaaaagaaaaccagaagctg
gaagcaagcagagatgaactccaatcaagaaaagctaaattggactaccttgaagttggt
acatgtcagaaagatgtcataaatatctgggataagaagttattaaactgcagagccaaa
atcagatgtgacatggaggatattcataccactctgaaagaaggtgtaccaaaaagccgc
cggggagaaatttggcaatttctagctgtacaacatcgcgtaagacatagactgccaagc
aaacaacaacctcctgacatctcatacaaagaactcttgaaacagctgacagctcagcaa
catgctatccttgtagatctaggcaggacattccctacacatccttacttctctacccag
ctgggagcagggcagctgtcactttttaatctcctgaaagcttattctttgctggacaag
gaagtgggttattgccagggtatcagttttgtggctggagtactgcttctacacatgagt
gaggagcaagcctttgaaatgctgaaattcctcatgtatgatcttggcttccgtaaacag
tacaggccagacatgctgtcactacagattcagatgtatcaactttcaagactcctccat
gattatcacagagacctctataatcatcttgaagagaatgaaatcagccccagtctttat
gctgcaccctggtttctcacgttgtttgcttctcagtttccattaggatttgtagccaga
gtttttgacattatctttcttcaaggaactgaagtcatatttaaggtagctctgagtcta
cttagcagccaagaagcacttgtaatggaatgtgagagctttgagaatattgttgatttc
cttaaaggcactatcccagacatgactaagcttcaaatggaaaagattattacccaggtt
tttgagatggatatttccaaacagcttcatgcctatgaagtagagtaccatgtactacag
gatgagctgcaggaaggtttgaatccctgtgatgatggtgaacctttggagaaattggag
agggccaacagtcagctaaagaggcaaaatatggacttgttggagaagctacagatagct
catgctaaaattcagagtctggaatccaacctggaaaacatattgtctcgagagaacaaa
atgcggagcttaatccagtcgctggaacaagagaagatggcatatcaaaagactgttgag
caaataagaaaatacctgccagcagaagcactgtccgactgtgaactgctcctgaaggaa
gtaaatgccaacccaaacaatagaacaaagcaaggaaataagccataa
DBGET
integrated database retrieval system
