Trachemys scripta elegans (red-eared slider): 117870894
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Entry
117870894 CDS
T07347
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117870894 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117870894 (DIS3)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117870894 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
DUF4611
YhfM
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
117870894
NCBI-ProteinID:
XP_034614242
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All DBs
Position
1:269882234..269909664
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AA seq
959 aa
AA seq
DB search
MLTSRTFLKRTRAGAVMKVVREHYLREDIACGAAACEQCGQQPGEPRLEAQPSGAASSLC
PAPHYLLPDTNVLLHQIDILEDPVITNVIVLQTVLQEVRKRSAPVYKRIRDVIANPEKHF
YSFTNEHHRETYIEQEQGETSNDRNDKAIRVAAKWYDEHLKKINNEETIQVILLTNDRKN
KEKAVEEGLTAYTCEEYIKSLIANPDLVDRLACVSDEGKEIESGRIIFSEHLPLSKLQQG
IKSGIYFQGTFRANRDNYLEATVWVHGDAEENKEIIIQGLKNLNRAVHEDLVAVELLAKD
QWVAPSSVVLQDEGQNEDDDENEEEKENTLKSSVNKNMLRPSGRVVGIIKRNWRPFCGML
SKSQIKEARRHLFTPADRRIPRIRIETRQASTLEGQRIIVAIDGWPRNSRYPNGHFVKNL
GTAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEEDMKFREDLRYLCVCSVDP
PGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMV
PELLSSNLCSLRSNVDRFAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRIDST
SMKDDITTSLRGLNKLAKILKKRRIDNGALTLSSPEVRFHIDSETHDPIDLQTKELKETN
SMVEEFMLLANISVAKKIHEEFSEYALLRKHPAPPPSNYDILVKAAKSKNLEIKTDSAKA
LADTLDKAESPEFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIR
RYADIIVHRLLAVAISADSTYPELTDKHKLADLCKNLNYRHKMAQYAQRASVAFHTQLFF
KNKGVVNEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPKPNLNYNDEVPSLTVGNTT
FYTFDKVKVNIMLDASNIQHQKIRMALVEPKILGSDVPNQTTELSTNSEPEKKKKKLKK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgttgacctcgcgcacgttcctgaagcgcacgcgggcgggtgcggtgatgaaagtggtg
cgcgagcactacctgcgcgaggacatcgcgtgcggggcggccgcctgtgagcaatgcggg
caacagcccggggagccccgcctcgaggcccagcccagcggcgccgccagcagcctctgc
cccgccccccactacttgctgccggacaccaacgtcctgctgcaccagattgacatactt
gaagatcctgttatcacaaatgtaattgtgcttcagacagttttacaagaagtgaggaaa
cggagtgcaccagtgtacaagcgaattagagatgtgattgccaatcctgaaaaacatttc
tattccttcactaatgaacatcatcgagaaacttatatagaacaagagcaaggagaaact
tctaatgaccgcaacgataaagccatccgggtagcagcaaaatggtatgatgaacacttg
aagaaaataaacaatgaggagacaatacaagttattttactaacaaatgacagaaagaat
aaagagaaggctgtggaagaggggttaactgcttatacgtgtgaagagtatataaagagc
ttgatagctaatcctgatcttgtagatcgacttgcttgtgtatctgatgaagggaaagaa
atagaaagtggaaggataattttttcagagcatcttccccttagcaaattacagcaaggc
ataaaatctggaatctactttcaaggaaccttcagagccaacagagataattatcttgaa
gctacagtatgggttcatggagatgctgaagagaacaaagaaataattatacaaggactt
aaaaatttaaatcgagcagttcatgaagatctagtagctgtggaactgttggcaaaagac
cagtgggttgcaccatcctctgtggttttgcaagatgagggtcaaaatgaagatgatgat
gaaaatgaagaggagaaagaaaatactctaaagtcttccgtaaacaagaacatgttgaga
ccatcaggaagagtagtaggtattataaaaagaaattggagaccattttgtggcatgctt
tccaaatcccagataaaagaggccagacggcatttgtttacaccagcggatcgcagaatc
cctcgaattcgaatagaaaccagacaagcttccacattagagggccaaagaattattgtt
gctattgatggttggcccagaaattccagatatcctaatggtcactttgtaaagaattta
ggaactgctggagataaagagactgagacagaagttctgcttcttgaacatgatgttcca
catcagcctttctcccaggctgttcttagctttctaccaaaaatgccatggagcattact
gaagaggacatgaaatttagagaagacttaaggtatctgtgtgtatgtagcgtggatcct
ccaggctgtactgatattgatgatgcattacattgcagagaactggaaaatggaaatcta
gaggttggtgtccatattgcagacgttagccattttattcgaccaggaaacgcgttggac
caagagtcagcaaaaagagggacaaccgtatatctatgtgaaaaaaggattgatatggtt
ccagagttgcttagctccaatttatgctccttgagatctaacgtggacaggtttgcattt
tcatgtatatgggaaatgaaccacaatgctgaaattttaaaaaccagatttaccaagagt
gttattaattccaaggcatcccttacatacgctgaagcacagatgagaattgattccaca
agcatgaaagatgatattactactagtttgcgtggactaaataaattagcaaaaattctg
aagaagagaagaattgataatggggccttaacactttcctcacccgaagttcgtttccat
atagatagtgaaactcatgatcctattgatttgcagacgaaagagcttaaagaaactaat
tccatggttgaagagtttatgttgcttgccaatatctccgtagcaaaaaaaattcatgag
gaattctcagagtacgccttgctccggaaacacccggctcctcctccatcaaattatgac
atccttgtgaaggcagcgaagtccaagaatttggaaattaagactgattcagcaaaggct
ctagctgacactttagacaaagctgaatctcctgaattcccatatctaaatacactgttg
cgaatcttggccactcgctgcatgatgcaagctgtctacttttgctctggaatggataat
gattttcatcactatggcttagcatcacctatttatacacattttacttcacccatcaga
aggtatgctgatataatagtacatcgactattagcagtggctataagcgcagacagtact
tatccagaacttacagataaacataaactagcagacctgtgtaaaaatctcaactaccga
cataaaatggctcagtacgcacaaagagcatcagttgcattccatacccagttgttcttc
aaaaacaaaggagtagtgaatgaagaggcgtatattttatttgtaagaaagaatgcaatt
gtggttctaatccccaaatatggcttagaaggtactgtcttctttgaagaaaaagacaaa
ccaaagccaaacctcaattacaatgatgaggtaccttcacttacagtgggaaacacaacg
ttttatacatttgacaaggttaaagtgaacatcatgttagatgcttccaacatccaacac
cagaaaattcgtatggcgctggtagaacccaagatactgggaagtgatgttccaaatcag
actacagagctgagcactaacagtgaaccagagaaaaagaagaagaagctgaaaaaatag
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