Trachemys scripta elegans (red-eared slider): 117871019
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Entry
117871019 CDS
T07347
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117871019 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tst04091
]
117871019 (FREM2)
Lectins [BR:
tst04091
]
C-Type lectins
Lecticans
117871019 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
117871019
NCBI-ProteinID:
XP_034614463
LinkDB
All DBs
Position
1:complement(293589022..293787560)
Genome browser
AA seq
3161 aa
AA seq
DB search
MQGSPAARTLLPALLLLLAGRGGGVRAQQPLPPGSPAFSYPSVLGPQEDASIVVANRGLR
VPFGRSVWLDPLSDLVLQVQPGDRCHLRVLDDDPLWLRPGRLIPQRFPCDFAPGEVTYWH
LGSRSPSRDRVRLQLRYDSPSRAVVLPLALEVEVLFAQLEVVTRNLPLTVESLLGTSNAL
DGRSLEFAFQPGSQRCRVGALPGLGGLPRYGELLGQPAAPWHPSAAGAPSPSVWWECEEF
LRLGLRYRHSAAGRSPNRDSLPLVVELREAAGAGALLKREHFQVLVRIRAGAENTPPRPS
FLAMLMMEVDQFVLTALTPDMLAAEDAESSPDLLLFNITSPFGPGQGHVVSTDDRSLPIA
YFSQRDVRELRVAYQPPAEDSARERLFELELEVLDPEGAASEPFAFMIVVKPMNTLAPVV
TRNTGLVLYEGQSRPLSSPGPSLLISDEDDLEQVRISVLAGLRHGHLALLEEPQAGEPQV
RKHFTVAELAAGRIIYQHDGSESPLNDNLVLRLEDGGARHHVEFLFPITLVPTDDQPPLL
NANTGLSLAEGDVAPIPARALSATDIDSDDAMLRFVLESGPAAGQLLLRQAQPSLGWDGE
NGGSPWRRVLGLPGDPPMYERLVSEWLQQDIVEGRLFYRHLGPHSPGPKVVLDQFVFRVQ
DDNDPPNRSGPQSFMVRVHPVDRLAPVLHGGSSLRLVVAEQQVTPLRRKHLRYTDQDSGD
REIHYTITQPPTDTDSNHPGGAKGTRLGSLVLTDDHSVEVMHFSQAQINHHKISYRPPQQ
ELGVAPRLAQFQYRVEDAAGNAAQGTFTIYLQPIDNQPPEITNSGFTVHEGARHVLGLAE
LDASDTDTEPTHLQFTLTQGPQHGQLQLSGHSLAMGAAFGLEDIKHGRVVYVHSGTESHS
DACSLDVSDGVHVVPITLKVTVHPVDDEVPTLRLPPGTLGSYLDVLENGAAEITTNVIQG
TDEDTDDLMLTFIVEDPPQHGDILVQGVPAERFSQRDLLDGAVVYAHTGGEIGLLPKEDT
FNLTLSDLSEEWSIGGNVVRGVSVLVTILPVDSQAPEVFVGEHLMVVEGDKRVITHAHLR
TEDVDTPSDDILCTIVAQPTSGYVENISPALGSEKSRAGTAISAFTLKDVRQGHIYYVQS
IHKGVEPVEDRFTFRCSDGINFSERHFFPIVIIPTNDEEPEIFMREFVVMEGMSLVIDTP
ILNAADGDIPADELTFTITKFPTHGHIVNQLINGTVLVESFTLAQITESSSIIYEHDDSE
TKEDSFEVKLTDGKHAVEKTVLIMVIAVDDETPRMTINDGLEVEIGETKIIHNRILKATD
LDSEDKTLTYIIRYGPGQGLLQRIKLSGGVENITLGMNFTQDEVDRNLIQYMHFGQEGMR
DLIKFDVTDGINPLIDRYFYVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDLNS
PDENLVFSITRAPVRGHLECTDQSGVPIKTFTQLQLAGNKIYYIHTSEDEVKMDSFEFEV
TDGYNPVFRTFRISISDVDNKKPVVTIHNLLVSESENKLITPFELTVEDQDTPDMLLKFI
ITQVPVHGQLMFNNTKPVTSFTKQDLNENLISYKHDGTESAEDSFSFTVTDGTHTDFYVF
PDTVFETRKPQTMNIRIMAVDNSVPQIVVNKGAPSLRVLATGHLGFMITNKVFKVEDRDS
LHVTLKIRITEAPHHGFLIHLGKGNHSITQFTQADIDDMKICYVLREGENATSDLFHFTV
EDGGGNKLKSQHFRLNWAWISLEKEYYLVNEDSKYLDVVLKRRGYLGETSFISISTKDGT
AEKDKDFKGKAQKQVQFNPGQTLATWRVRILSDGEHEQSETFQIVLSEPVMAVLEFPEVA
TVEIIDPGDESTVFISQSAYTIEEDIGELFIPVRRSGDVSQELMVICYTQQGTATGTVPT
SVLSYSDYISRPEDHNSNLRFDKDEREKMCRIVIIDDSLYEEAETFDVLLSMPMGGRIGS
EFPGTQVTIVPDKDDEPAFYFGDVEYYVDESAGFVEVRVWRTGTDLSKAATVTVRSRKTE
PITAEAGVDYVGISRNLDFAPGVNMQTFRVIILDDLGQPVLEGIEKFELVLRMPMNAILG
EPSKATIFINDSVSDLPKMQFKEPMYIGNENYGQISAMIYRSGDIRYTSTVRCYSRQGSA
QVMMDFEERPNTDDSIITFLPGEAEKPCTLMLVDDSFHEEEEELRLVLGTPRSDSSYGAS
IGEQNETLIRIRDHADKAIIKFGETKFSVSEPKDVGQLVVVKIPVLRLGDTSKVSIVRVH
TKDGSATSGEDYHPVSEEIEFKEGETQHIVEIEVLFDGVREMREAFTVHLKPDENMVAEI
QTAKAIVYIEEMNSMADVTFPSVPQVASLLIYDDTSRAKDRTGPVAGYPVVCITACNPKY
TDYDKTGSICASENINNTLTRYRWLVSAPTGPDGVTSPMREVDFDTFFTSSKIITLDSIY
FQAGSRVQCAARAVNSDGNEGLELMSPIVTISTEEGLCQPRVPGVVGAEPFSAKLRYTGP
EDPDYANLIKLTITMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCSNLLDYTEVKT
HHGFLTDATKNPDVIGETIPYQHSASIRGPSTLRFYRNLNLEACLWEFVSYYDMSELLTD
CGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFVYDTAIL
WKDGIGSPPEAELQGSLYPTSMRISEEGRLVVNFKTEARFHGLFVMSHPASSLSSMVMSA
DHPGLTFSLSLVRSEPTYNQPIQQWSFISDFAVRDYSGTYTVKLIACTTVPHQEYSVPVI
CNPREPITFDLDIRFQQVSDPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESDVAFTEG
DIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYSPPNAEYGCLADSPSLLYRFK
IVDKAQPETQATSFGNVLFNAKLAIDDPEAIPLVKQPGSDGFKVESTPLFQVSLGREWYI
HTIYTVRSKESANRGIGKRSVEYQYHSLVSGGNPGTSMQIRQKRGVKEAPELAKAIGIEN
SRGTNIQHIALDHTNKKQIPQREVTVNGILPRELNNRNPEVNIVTIIGGAAAVLLAIGFI
AIIILLLKHKQSSEKKEVAKGSGSSEPMMPPHNYTSDSSEV
NT seq
9486 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcagccccgccgcacggactctgctgcccgcgctgctgctgctgctggctggc
aggggcggcggggtccgggcgcagcagccgctcccgccgggcagccccgcattctcctac
ccctcggtgctgggaccccaagaagacgcctccatcgtggtggcgaaccgagggctgcgc
gtccccttcggccgctctgtctggctggacccgctgagcgacctggtgctgcaggtgcag
ccgggggaccgctgccacctgcgcgtcttggacgacgacccactgtggctgcgcccgggc
cgcctaatcccgcagcgcttcccttgcgacttcgcccccggggaggtgacgtactggcac
ctgggctcccgcagcccgtcccgggaccgggtccgcctacagctgcgctacgactcgccc
agccgcgccgtggtgctgcccctggcgctggaggtggaggtgctcttcgcccagctggag
gtcgtcacccgcaacctgcccctcaccgtggagagcctgctgggcaccagcaacgcgttg
gacggccgcagcctggagttcgccttccagccgggcagccagcgctgcagggtgggcgcc
ctgccggggctgggcgggctgccccgctacggggagctcctcggtcagccggctgccccg
tggcatccgtcggcggccggcgccccctcgccttcggtctggtgggagtgcgaggagttc
ctgcggctggggctgcgctaccggcactcggcggccggccgctccccgaaccgagactcg
ctgcccctggtggtggagctgcgggaggcggcgggcgctggcgcgttgctgaagcgggag
catttccaggtgctggtgcggatccgggctggcgccgagaacacgccgccccgacccagc
ttcctggccatgctgatgatggaggtggaccagttcgtgctcaccgccctcacccctgac
atgctggcagccgaggacgccgagtcctccccggacctgctgctcttcaacatcacctcc
ccctttgggccaggccagggccatgtggtcagcaccgacgaccgcagcctgcccatcgcc
tacttcagccagcgggacgtgcgggagctgagggtcgcctaccagccgcctgcagaggac
tcggccagggagcggctcttcgagctggagctggaggtgctggatcccgagggcgctgcc
tctgagcccttcgccttcatgatcgtggtgaagcccatgaacacgctggcacccgtggtc
acccgcaacacaggcctggtgctctatgaggggcagtcgcggccgctctccagcccgggc
cccagcctgctcatcagtgatgaggatgacctggagcaggtgcggatcagtgtgctggca
gggctgcggcacgggcacctggccctgctggaggagccccaggccggggagccccaggtc
cgcaagcacttcacggtggccgagctggcggctggccgtatcatttaccagcacgacggc
agcgaatcccccctcaatgacaacctggtgctgcggctggaggatggtggtgcccggcac
catgtcgagtttctcttccccatcaccctggtgcccaccgatgaccagccacccctgctc
aacgccaacacggggctgtctttggccgagggtgacgtagcccccatccctgcccgtgcc
ctcagcgccaccgacatcgactccgacgacgctatgctgcgcttcgtgctggagtctggc
cctgctgcagggcagctgctgctccgtcaggcccagccatccctgggctgggatggtgag
aatgggggctccccctggaggagggtgctgggcttgcctggggacccaccaatgtacgag
aggctggtgagtgaatggctgcagcaggacatcgtggaagggaggctcttctacaggcac
ctcgggccccacagccctggccctaaggtggtgctggaccagtttgtctttagggtccag
gatgacaacgacccgcccaaccgctctgggccccagagctttatggtccgggtgcaccca
gtggaccgcctggccccggtgcttcatggtggcagcagcctgcgtctggtggtggctgag
cagcaggtgaccccactgcggaggaagcacctgcgctacacagatcaggactctggggac
cgggagatccactacacgatcacccagccccccactgacacagactccaaccaccctggg
ggggccaagggcacccgcctgggatccctggtgttgaccgatgaccactcagtggaggtg
atgcacttcagccaggcccagatcaaccaccacaagatctcctaccggcccccacagcag
gagctgggagtggctccccgcctggcccagttccagtaccgggtggaggatgcagctggt
aatgctgcccaaggcaccttcaccatttacctgcagcccatagacaaccagccccctgag
atcaccaacagcggcttcactgtgcatgagggggccaggcatgtgctgggcctggctgag
ctggatgctagcgacactgacactgagcccactcacctccagttcaccctgacccagggt
ccccagcatggacagttgcagctctctgggcatagtctggccatgggagcagcctttggc
ttggaggacattaaacatggtagggtggtctatgtgcacagtggtactgagtctcacagt
gatgcctgcagcctggatgtgagtgatggggtccatgtggtgcccatcacactgaaggtg
actgtgcaccctgtggatgatgaggtgcccaccttacggctgcccccagggacacttggc
tcctacttggacgtgctggagaatggtgctgctgagatcaccactaacgtcatccagggc
acggatgaggatacagatgatctgatgctgactttcattgtggaggaccctccccaacat
ggggacatcctggtccagggagtgcctgcagagaggttttcccagagagacctgctggat
ggggctgtggtatatgctcacacgggtggtgaaatagggctgctgcccaaagaagatacc
tttaacctcactttgtctgacctgtctgaagagtggagcattgggggcaatgttgttcgt
ggagtttcagtgctggtgacaatccttcctgttgacagtcaagcccctgaggtttttgtg
ggggaacacttaatggtagtggagggtgacaaaagggtcattacacatgcccacttaagg
actgaagatgtggatacacctagtgatgatattctgtgcaccatagttgcacagccaacc
tccggttatgtagagaacatctctccagccctaggatctgaaaaatccagagcaggtaca
gctataagtgcctttactttgaaagacgtcaggcaagggcacatttattacgttcaaagc
atccataagggtgtggagcctgttgaagacaggttcactttccgctgctctgatggcatt
aacttttctgaaaggcacttcttccccattgtcattatcccaaccaatgacgaagaacct
gaaatctttatgcgagagtttgtagtgatggaaggaatgagcctggttatcgatactccc
atcctcaatgcagcagatggggacatccctgctgatgaactgaccttcactatcactaag
tttcccacgcatggccacattgtgaaccagctgatcaatgggacagtcttggtggagagc
ttcaccctggctcagataactgagagctccagcattatctatgaacatgatgactctgaa
acaaaggaagacagctttgaggtgaaactcacagatggtaaacatgctgtagagaaaact
gtgctaatcatggttattgctgtagatgatgagacacccagaatgaccatcaatgatggg
ctggaagttgaaataggggagactaaaatcatccacaacagaatactgaaggctactgat
ctagattctgaagacaaaaccttgacttacattataaggtatggtccaggacaaggcctc
ttacaaagaataaagctttcaggtggggttgagaatatcacactgggaatgaactttacc
caagatgaagtggacagaaacttaattcagtacatgcattttggccaagaaggtatgcgg
gatcttatcaaatttgatgtgacagatgggataaatcctctcattgaccgatatttttat
gtgaccataggtagcattgatattgtcttcccagatgtgatcagcaaaggggtatccttg
aaggaagggggaaaagttacacttaccactgatttactgagcaccagtgacttgaatagc
ccagatgaaaacttggttttcagtattacccgggcacctgttcgtggccatcttgaatgt
acggatcagtctggggtgcccatcaaaaccttcactcagctccagttagcaggcaataaa
atctactacattcacacttcagaagatgaggtgaaaatggacagctttgagtttgaagtg
actgatggttataacccagtatttcgtactttccgaatttccattagtgatgtggataat
aaaaagccagtggtcacaatccataacctgctggtgagtgaaagtgaaaataaactgata
accccctttgaactgacagtggaagaccaagacacccctgatatgttgcttaaatttatt
atcacccaagtgccagttcatggtcagctcatgttcaataacaccaagccagttacatcc
tttaccaaacaagatctgaatgaaaatcttataagctacaagcatgatggcacagagtca
gctgaagacagcttctctttcactgttacagatgggacacatactgatttctatgtcttc
cctgacactgtgtttgaaacaaggaaaccccaaacaatgaacattcggataatggctgtg
gacaatagtgtaccccaaattgtagtaaataagggtgccccttctctccgtgttttggcc
actggccacttgggttttatgattaccaacaaagtattcaaagtggaagacagggacagc
ttgcacgttaccctcaagatcaggatcacagaggctcctcaccatggcttcctgatccac
ctgggaaaaggcaaccatagtatcactcagttcacacaagctgatattgatgacatgaag
atatgctatgttttaagagaaggtgaaaatgccacaagtgaccttttccattttactgtt
gaagatggtggaggcaataagctgaagagccagcattttcgtttgaactgggcctggatc
tctttagagaaggaatattatttggtaaatgaagactctaaatatctagatgttgttctt
aagcggagaggttacctgggagaaacctcttttattagtattagcactaaagatggtact
gctgagaaggataaagacttcaaaggaaaagcccagaagcaggtgcaattcaatcctggc
caaaccttagctacttggagagtgcggattttgagtgatggtgaacatgagcagtctgag
accttccaaattgtgctttctgagcctgtcatggctgtcctagagtttcctgaagtggct
acagtggaaattattgacccaggagatgaatcaaccgtttttatttctcaatccgcctac
acaattgaagaagacattggagaactgttcattcctgtcagaagaagtggagatgtcagc
caggaattgatggtgatctgctatacacagcaaggaacagcaactggtactgtcccaacg
tctgtgctgtcctactcggactacatatccaggcccgaggaccataacagcaatctccgc
tttgacaaagatgaacgagagaaaatgtgccgtattgtcatcatagacgattccctgtat
gaagaagctgagacgtttgatgttctgctgagcatgcctatgggtggaagaattggttcg
gaattcccagggactcaggttactattgtgcctgacaaagatgatgaaccagccttctac
tttggagatgtcgaatactatgttgatgagagtgctggctttgttgaggtgcgtgtctgg
agaactggaactgatttgtccaaagctgccactgttacagtaaggtctcgcaaaactgag
ccaataactgcagaggctggggtagattatgtaggcatcagtcgtaatttggattttgcc
cctggagtcaacatgcagactttccgtgtgatcattctggatgaccttggacagccagta
ttagaaggaattgagaagtttgagcttgtgctgcgaatgcccatgaatgctatccttgga
gaaccaagcaaagccaccatcttcatcaatgactcagtctctgatttgcctaagatgcag
tttaaagaacctatgtacattggcaatgaaaattatggacagatttctgccatgatatat
aggagcggggatatccgctacacatctacagtgcgctgttatagtcggcagggttcagcc
caggtaatgatggacttcgaagaacgtcctaacactgacgattccatcatcactttcctt
cctggtgaggctgagaaaccttgcaccctcatgcttgtggacgactctttccacgaagaa
gaggaagagctgcgtctggttcttggcactccaagaagtgattcctcctacggtgcttct
attggtgaacaaaatgaaaccctgataaggatcagagatcatgcagacaaggccattatt
aagtttggtgagaccaaatttagtgtcagtgaaccaaaagatgtaggacagctggttgtt
gtaaaaattccagtgcttcgtctgggagacacttcaaaggtttccattgtgagggttcac
acaaaggatggctctgccacctctggagaagactatcaccccgtgtcagaagaaattgag
tttaaggagggtgaaacacagcacattgtggagattgaggttctttttgatggcgttagg
gagatgagagaggccttcactgttcacctgaagcctgatgagaacatggtggcagagata
cagacagccaaggccattgtgtacattgaagaaatgaacagcatggcggatgtcaccttt
ccttcagtccctcaggttgcttctcttttgatatatgatgatacttctagagccaaagac
agaactggtccagttgctggctaccctgttgtctgtatcactgcttgcaatcctaaatat
acagactatgacaagacaggttcaatatgcgccagtgagaatatcaataacacgctgact
cgataccgatggctggttagtgcccctactggccctgatggtgtgaccagtcccatgaga
gaggttgactttgatacattcttcacttcctccaagataatcacactggactccatttac
tttcaagctggctctcgggtccagtgtgcagctcgtgctgtaaattcagatgggaatgaa
ggcctagagctcatgagtcctattgtaacaataagcaccgaggagggtctttgccagccc
cgggtgccaggtgtggttggggcagagccattctctgccaagctgcgctacactggcccg
gaagatccagactatgctaatctaatcaaactgaccatcacaatgcctcatattgatggc
atgttacctgttatctccacaagagagctgtccaactttgagctaaccctcagccctgat
ggaactagggtgggaaatcataaatgctccaacctgttggattacacagaagtgaagact
caccatggtttcttgactgatgctaccaaaaatccagatgtgattggagagaccattccc
taccaacacagtgcatcaatcaggggtcccagtactttacgcttctaccgaaatctgaac
ctggaggcctgtttatgggagtttgtcagctattatgacatgtctgagctcctcactgat
tgtggaggcaccattgggacagatggacaggtcctcaatctagtgcagtcctacgtgacc
ttgcgagtccccttgtatgtctcctatgttttccattcgcctgtgggtgtcggtggctgg
cagcattttgacctacagtctgaacttcggctgacttttgtgtatgacactgccatcttg
tggaaggatggaattggcagcccacctgaagcagagctccaaggttctctctatccaacc
agtatgcgcatcagtgaagaagggcgtttggttgtcaacttcaagactgaagcccgattt
catggtttatttgtgatgtctcatcctgcttcctctctgagctccatggttatgtcagct
gatcacccaggcctgacatttagcctcagcctcgtgcggagtgaaccaacgtacaaccaa
ccaatacagcagtggagctttatttcagattttgcggtacgagactattctggaacatac
accgtgaagctgatagcttgtaccacggtacctcaccaggagtacagtgtaccagtgatc
tgtaatcctagagaaccaatcacatttgaccttgatatccgattccagcaggtcagcgac
ccagtggctgctgagttcagcctgaatacccagatgttcctcctctctaagaagaccctc
tggttatctgatggctcgatgggatttggtcaggagagcgatgttgctttcacagaaggt
gatattatatatggtcgtgtgatggtggatccagtacagaacctgggtgattccttttac
tgtagcattgagaaggttttcctgtgcactggagcagatggatatgtacccaagtatagt
ccaccaaatgcagaatatggctgtctagctgattctccatccctcttatatagatttaag
attgtggacaaagctcaaccagagacacaagccacaagctttggaaatgtgctttttaat
gcaaaactagcaatagatgatcctgaggcaattcctttagtcaagcaacctggctcggat
ggatttaaagtagaatcaacaccactgtttcaggtgtctttgggtagagaatggtacata
catacaatctacactgtgagatcaaaagaaagtgccaaccgaggtattggcaaaagaagt
gtggagtaccaatatcactctctggtcagtggtgggaatccaggaacttcaatgcagata
cgtcaaaagagaggggtcaaagaagctccagagcttgctaaagcaattggcatagaaaac
agcagaggaactaacattcagcacatagctttggatcacaccaacaagaaacagatccca
caaagagaagttacagtcaatggaattctccccagggagctgaataacaggaacccagag
gtcaacatagtaacgatcatcggcggagctgctgctgttttacttgccatcggtttcatt
gcaattattattttgctgttaaagcataaacagagctcagagaagaaagaagtcgcaaag
gggtcagggagcagtgagccaatgatgccaccacataattacactagtgacagctctgag
gtttga
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integrated database retrieval system
