Trachemys scripta elegans (red-eared slider): 117871026
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Entry
117871026 CDS
T07347
Symbol
SUPT20H
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117871026 (SUPT20H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117871026 (SUPT20H)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
117871026 (SUPT20H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
117871026
NCBI-ProteinID:
XP_034614486
LinkDB
All DBs
Position
1:295226569..295257480
Genome browser
AA seq
794 aa
AA seq
DB search
MQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRMPYEEGELLEYLDAEELPPILVDLL
EKSQVNIFHCGCVIAEIRDYRQSGNMKSPTYQSKHVLLRPTMQTLICDVHSITSDNHKWT
QEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNR
QQDVAHYPTPPQLRLLDYLQKRKERKGAQQYDLKISKAGNCVDMWKQNPCYLTAPSEVDV
EKYAKVEKSVKPDDSQPTVWPAHEIRDDYVFECEVGNQLQKTKLTIFQSLGNPLYYGKIQ
TFKGSEENDSPVTPSQFLIGSKTDAERVVNQYQELVQSEAKCPVKMVHNSGGSVNLSHLS
PGKEMEQPESLSGSVQSSVLGKGVKHRPPPIKLPSSSGSSSSGNIFSPQQSSGHLKSPTP
PPPSKPPSLSRKQSMDLSQVSMLSPAAMSPASSSQRSGTPKPSTPTPTNTPSSTPHPPDA
QSSTPITPSATPTPQDSGFTPQPTLLTPFAQQQMSLSQALPVMTIPLSTMVTSITTGTTS
TQVMANPAGLNFINVVGSVCGAQTLMSGSNPMLGCTTGAITPAGINLSGILPSGGLVPSA
LPAAMQSASQAGSPFGLKNASGLRPLNLLQLPGGSLIFNPLQQQQQQLSQFSPQQQSQQP
ATSSPREQGEQSAEQCPANQDQALSAQQAAVINLTGVGSFMQPQAAVLSQLGSAVNRRGQ
SLPQQRLQLSSALQQQQQQALQQQQQQIQQLRFLQHQMAMAAAAAQTAQLRHQHHSGSQS
KSKRKRGTLTPPKS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagacgttgtcatgtctggtagtgaacctctatccagggaatgagggttattca
ctgatgctcagggggaaaaatggatcagattctgagaccattcgaatgccttatgaggaa
ggtgaactccttgaatatttggatgcagaggagctgccacctattttggttgatctttta
gaaaaatctcaggttaatatttttcattgtgggtgtgtcatagcagaaatacgtgactac
aggcagtctggtaatatgaaatctccaacataccaaagcaaacatgttcttctgcgtcca
acaatgcagactttaatttgtgatgtgcattctataacaagtgacaaccacaaatggaca
caggaagacaaacttctacttgagagccaacttatcttagctacagcagagcctttgtgt
cttgatccttcgatagcagtaacctgcacagcaaacagactcctctataacaagcagaag
atgaacactcgcccaatgaaacggtgtttcaagagatattccaggtcatctctgaatcgg
cagcaggatgtggcacattatccaactccacctcagctcagactacttgactacttacag
aaaagaaaggaaaggaaaggagcccagcagtatgacctcaaaatttctaaagctggaaat
tgtgtagatatgtggaaacagaacccttgctacttgactgcaccttctgaagttgatgtg
gaaaaatatgccaaagtggaaaagtctgtcaaacctgatgactctcaacctactgtctgg
ccagcacatgaaataagagatgattatgtgtttgaatgtgaagttggtaatcaacttcag
aaaacaaaactgaccatttttcagtcccttggtaatccgctgtactatggtaaaatacag
acgttcaaaggcagtgaggagaatgacagcccagtaactccatcacagttccttattggt
tccaagactgatgctgaaagggtagtgaaccaataccaggaactagttcaaagtgaagct
aaatgtccagtgaagatggttcataattcaggtggatcagtcaacctaagtcatctttct
ccagggaaggaaatggaacagccagagagtctatcagggtctgtgcagtcttcagtattg
gggaaaggtgtaaaacatcgacctcctcctatcaaactaccttcaagttcaggaagtagt
tcttcaggtaatatttttagtccacagcagtcaagtggccacctaaaatccccaactcct
cctcctccttctaagcctcccagtctttctcggaaacagtctatggatcttagtcaagtt
agcatgctttctccagctgccatgtctcctgcgagctcttcacaaaggtctggaactcct
aaaccatctactcctactccaaccaacaccccttcatcgaccccacaccctcctgacgct
cagagctcaactcctattaccccttctgccacccctactccccaagattcaggcttcacc
cctcagcccactttgttaaccccgtttgctcagcagcaaatgtctctgagccaggcattg
cctgtaatgaccattcctctttccaccatggtaacatccattactacaggaaccacctcc
acccaggtcatggcaaaccctgcaggacttaacttcatcaatgtagtgggctctgtgtgt
ggagcacagacattgatgagtggctcaaaccccatgctggggtgtactactggtgccata
acccctgcaggtataaatctgagtggcattttaccatcaggaggtctggtgccaagtgca
ctgccagctgcaatgcagtctgcctctcaagcaggcagcccttttggtttaaaaaatgct
tcaggtcttcggcccttaaatctactccagcttcctggtggctcacttattttcaaccca
cttcagcagcagcagcagcagctctctcagttctccccacagcagcagtcccagcagcct
gcaacctctagtccacgagaacagggagaacagagtgctgagcaatgtccagccaatcaa
gaccaagccttatctgcccagcaagccgctgttattaacctgactggagtagggagcttt
atgcaacctcaagcagcagtgttgtctcagcttggctctgccgtgaacagacgtgggcaa
agccttcctcagcagagactccagctctcctctgccttacagcagcaacaacaacaagcc
ttgcagcagcagcagcaacagatacaacagttgcgattcttgcagcatcaaatggctatg
gcagcggcagcagcacaaacagctcagctccgacaccagcaccattcaggcagccagtcc
aaaagtaaaaggaaacgaggcacactgacccctcccaagtcctga
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