Trachemys scripta elegans (red-eared slider): 117871029
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Entry
117871029 CDS
T07347
Symbol
SMAD9
Name
(RefSeq) mothers against decapentaplegic homolog 9 isoform X1
KO
K16791
mothers against decapentaplegic homolog 9
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04081
Hormone signaling
tst04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117871029 (SMAD9)
09133 Signaling molecules and interaction
04081 Hormone signaling
117871029 (SMAD9)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
117871029
NCBI-ProteinID:
XP_034614489
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Position
1:295353962..295414629
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AA seq
466 aa
AA seq
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MHSSTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMEELERALS
CPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSK
QKEVCINPYHYRRVETPVLPPVLVPRHSEFNPHLSLLAKFRSASLHSEPLMPHNATYPDS
FQQTPCTPFPSSPSNMFSQSPSSISYPNSPGSSSGPGSPYQLTVETPPPYNARETPGNQN
GRSVDATADNQLVLSLPNGDFRPVCYEEPQHWCSVAYYELNNRVGETFQASSRSILIDGF
TDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRN
CNYQHGFHPATVCKIPSGCSLKIFNNQLFAQLLAQSVNHGFEVVYELTKMCTIRMSFVKG
WGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcactccagcacccctattagctcattgttctccttcaccagcccagcagtgaagaga
ctgctgggctggaagcaaggagatgaagaggagaagtgggcagagaaggctgtggattcc
ctggtgaagaaactgaagaagaagaaaggcgctatggaagaacttgagagggctctgagc
tgtcctggccagcccagtaaatgtgtcacaatcccacgctccttggatgggaggctgcag
gtgtctcatcgcaaggggctgccccatgtcatctattgccgagtgtggcgttggcccgat
ttacagtctcaccatgaattgaaaccactggaatgttgcgagttcccatttggctcgaag
cagaaagaagtttgcatcaacccctaccattaccggcgggtggagaccccagtgttgcct
ccagtactggttccaagacacagtgagtttaacccacatctcagcctccttgccaagttc
cggagtgcttccctccacagtgagcctctgatgccacataatgccacctatcctgattct
ttccagcaaactccctgcaccccttttccatcatcacccagtaatatgttctctcagtca
cccagcagcatcagctatcctaactctccaggaagttcttctggaccaggaagtccatat
caactcacagttgaaacacccccaccttacaatgcaagagaaacaccaggaaaccaaaat
ggacgatcagtggatgcaacagctgacaatcagttagtgctatcattgcccaatggagac
tttcgacctgtttgctatgaggaaccccagcactggtgctcagttgcctactatgaactc
aacaaccgagtaggggagactttccaggcttcttctcggagtattcttatagatggattc
acggatccttcaaataacaggaaccgattctgtcttggactgctctctaatgtcaacagg
aattctactatagaaaacaccaggcgacacataggaaaaggtgtccatctctattatgtt
ggtggcgaggtgtatgcagaatgcgtgagtgacagcagcatttttgtacagagccgcaac
tgtaactatcagcatggcttccacccagccactgtctgcaagatccccagcggctgcagc
ctcaagattttcaacaaccagctctttgcccagttgctcgcccagtcagtcaaccatggc
tttgaagtggtgtatgagctgaccaagatgtgcactatccgaatgagctttgttaaaggc
tggggagcggagtatcatcgccaggacgttacaagcactccttgctggattgagattcat
ctgcatggaccattgcaatggctggataaggtgctcacacagatgggctcacctcataac
cccatctcctcagtctcttaa
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