Trachemys scripta elegans (red-eared slider): 117871052
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Entry
117871052 CDS
T07347
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117871052 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117871052 (PDS5B)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117871052 (PDS5B)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117871052 (PDS5B)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
117871052 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
117871052
NCBI-ProteinID:
XP_034614536
LinkDB
All DBs
Position
1:complement(298541666..298814613)
Genome browser
AA seq
1448 aa
AA seq
DB search
MAHSKTRANDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDGHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYS
LQSEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYL
YATLDSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRNQLEMLVSPSCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVSIGHIAMLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAASAIVKLAQEPCYHEIIT
LEQYQLCALAVNDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKIQDIEQLKDIKEC
LWFILEILMSKNENNSHAFIRKMVENIKQTKDAQGPDDPKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARYFTQPDKNFSNTKNYLPPEMKSFFTPGKPKAANVLGAVNKPLSA
AGKQSQSKSSRMETVSNASSSSNPSSPGRIKGRLDSTEMDHSENEDFTMASPLPGKKTDK
RDDSDLVRSEMEKPRGRKKATITDSEEKLGIDDLNKLGQEQKLRGSQRGRKRAAVVSESD
EPQWPEEKRLKEDVLESEDEQNSPPKRGRRGRPPKAASGDTPKEEPTAKTSKRGRKKAVP
VASAVEEEEEEEGQSENVEQKPKGRQYRTPRRAQQRVEPSETSAVESTQSTPQKRRGRPP
KTPPSQQKKGRAGRTKQAASKENESSEEMDIFQGSSPISDDIPQEEVMEEEEVSTISVRR
RTSKRERR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacacgagccaatgatggaaaaattacgtatcctccaggagtcaaa
gaaatatctgataaaatatctaaagaagagatggtgaggcggttaaagatggttgtgaaa
acattcatggatatggaccaggactcggaagaagaaaaggagctgtatctaaatcttgca
ttacatcttgcttcagatttttttctcaaacaccctgataaagatgtgcgcttgctggta
gcatgttgccttgctgatattttcagaatttatgctcctgaagctccatacacctcacca
gataaactgaaagatatatttatgtttataacaaggcaactgaaaggattagaagataca
aaaagcccacagttcaatagatatttttatttacttgagaatattgcttgggtcaaatct
tataatatatgctttgagctagaagacagcaatgaaattttcacacagttgtacagaacg
ctgttttccgtaataaacaatggtcataatcaaaaagtacacatgcacatggtggatttg
atgagctctatcatttgtgaaggagatactgtgtctcaggagcttttggatacagtttta
gtgaatctagtgccagcacataagaatttaaacaagcaagcatatgacttggcaaaggct
ttactaaagaggacagctcaagctattgaaccgtacattactaacttctttaatcaggtg
cttatgcttgggaaaacttctatcagtgatctgtcagagcatgtctttgacttaattctg
gagttgtacaatattgacggtcatctcttgctttctgttttaccgcagcttgaattcaaa
cttaagagcaatgacaatgaagaacgcctgcaggttgtaaaactactagcaaaaatgttt
ggggcaaaggattcagagttggcatctcaaaacaaaccactttggcagtgctacttgggg
aggtttaatgatatccatgtacctatccggcttgaatgtgtgaaatttgctagccactgc
cttatgaaccatccagatctagcaaaagatttaacagaataccttaaagtaaggtcacat
gaccctgaagaagccattaggcatgatgttattgtatccatagttactgctgctaaaaaa
gatcttttgcttgtcaatgatcacctacttaattttgtaagagagagaacactggacaaa
cggtggagagtgagaaaagaagctatgatgggacttgcccagatatacaagaaatattca
ttacagtcagaagcggggaaagaagctgcaaaacaaatttcatggatcaaggacaaactg
ctacatatatattatcaaaacagtattgatgaccgattgcttgttgaacgcatctttgct
caatatatggtccctcacaatttggaaacaaatgaacgaatgaaatgtttatattacctt
tatgcaacactggactcaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctacgacaccaggtaaaggacttggtcgacttaattaaacagcccaaaacagatgcc
agcagtaaagctatattctcaaaagtgatggtcattacaagaaacttgccagatcctggt
aaggctcaggatttcatgaagaagttcactcaagttctggaagatgatgagaaaataaga
aaccagttagaaatgcttgttagcccatcatgttcttgcaagcaggctgaaggatgtgtg
cgagaaattacaaagaagttgggcaatcccaaacaacctacaaaccctttcctggaaatg
attaagtttcttctagagaggatagcccctgtgcacattgatacagaatccatcagtgcc
cttatcaagcaagtaaacaagtctatagatggaacagcagatgatgaagatgagggtgta
cctactgatcaggcaatcagagcaggtcttgaattgcttaaggtcctgtcatttacacac
cctatctcatttcattcagctgaaacttttgaatcccttctggcttgcctgaaaatggat
gatgaaaaggtggcagaagctgcattacaaattttcaaaaacacaggaagtaaaattgaa
gaggactttcctcacatcagatctgctttgctcccagtcttgcatcacaaagctaaaaaa
ggcccccctcgtcaggccaagtatgccattcactgcatccatgcaatattttccagcaaa
gaaacacagtttgcacagatatttgagccactgcataagagcctagatccaagcaacctt
gaacatctcattacaccattggtttctattggtcatatagccatgctggccccagaccaa
tttgctgcccctttgaaatccttggtagccacctttattgttaaagatttgctaatgaat
gataggcttcctgggaaaaagacaactaaactttgggttccagatgaggaagtttctcca
gaaacgcttgtcaaaatccaggccattaagatgatggttcgatggttgctaggaatgaag
aataaccacagtaaatcaggaacttctactctgagattgctaacaacaatattgcatagt
gatggagacttgacagaacagggaaaaattagtaaacccgatatgtctcgtctgaggctg
gctgctgctagtgctattgtgaagctggcacaggaaccttgttaccatgaaatcatcaca
ttagaacaataccagctatgtgcattagccgttaatgatgagtgttaccaagttagacaa
atatttgctcagaaactccacaaaggcctttcccgactacggctccctctggaatatatg
gccatttgtgcactgtgtgcgaaagacccagtgaaggaaagaagagcacatgctaggcag
tgccttgtgaaaaacataaacgtgagaagagaatatctgaagcagcatgcagcagtgagt
gaaaaactattgtcacttctaccagaatatgttgttccatatactatccaccttctggca
catgacccagattatgtgaaaatccaggatattgaacaacttaaggacattaaagagtgc
ctgtggttcatactggaaatactgatgtctaaaaatgaaaataatagtcatgcgtttatc
agaaaaatggtggaaaacattaagcagacaaaagatgctcaaggaccagatgatccaaaa
atgaatgaaaaactctacacagtttgtgatgtagcaatgaatatcattatgtcaaagagt
acgacatacagtttggaatcccctaaagatccagtacttccagctcgatatttcacgcag
cctgacaagaatttcagtaataccaaaaattatctccctccggaaatgaaatcttttttc
actcctggaaagcccaaagcagccaatgttcttggagcagttaataagcctctttcggca
gcaggcaagcagtcccaatccaaatcttcacgaatggaaactgtaagcaatgccagcagc
agttcaaatccaagctctccaggaaggatcaaagggaggcttgacagtactgagatggac
cacagtgaaaatgaagatttcacgatggcttcacccttaccaggaaagaaaactgacaag
agggacgactctgatcttgtaaggtcagagatggagaagcccagaggtagaaagaaagca
accatcacagactcagaagagaagttgggcatagatgacctgaataaattggggcaggaa
cagaaacttagaggcagtcagcgggggaggaagagagctgcagttgtttcagaatctgat
gaaccacagtggccagaggaaaagaggctaaaggaagatgtattagaaagtgaggatgaa
caaaacagtccaccaaagaggggaagaagaggacgacctcctaaagcagctagtggggat
acaccaaaggaagaaccaacagcaaagacatctaaaaggggcagaaaaaaagcagtgccc
gtagcatcagcagtggaggaagaggaggaggaggaagggcaaagtgaaaacgtggaacag
aagccaaaaggcaggcaatacaggacaccaagaagagcacaacaaagagtagaaccatct
gaaactagtgcagttgaatcaacacagtctacaccacagaaaagacgaggaaggccacca
aaaacaccaccatcgcagcaaaaaaaaggccgtgctggacgcaccaaacaagcagcaagt
aaagaaaatgaatctagtgaagagatggatatatttcagggcagttctcctatcagtgat
gacattccccaagaagaagtaatggaggaagaagaagtttccacgatcagtgtacgtcgc
agaacttccaaaagagagaggcgatga
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integrated database retrieval system
