Trachemys scripta elegans (red-eared slider): 117871099
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Entry
117871099 CDS
T07347
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117871099 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117871099 (NUP58)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117871099 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
PSY3
GAIN_ADGRA3
NET2A_C
Nup49_C
ASNSD1-SEP
Motif
Other DBs
NCBI-GeneID:
117871099
NCBI-ProteinID:
XP_034614626
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All DBs
Position
1:complement(303816092..303871104)
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AA seq
600 aa
AA seq
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MSAGFSFGAGTLGSAAAAAAGAGGGGGGGFSFGAVQPSSTGGLNFGTLGASTAAATTSAP
SVGFGSGLFGSKSTTGLALGGTNTGTATTIATGLTLGAPAATSASTTGFSLGFNKPAGSA
TPFALPITSTSAGGLSLSSALTSTPAAGSTGFTLNLGGTTAPTTSASTGLSLGGALAGLG
GTLFQNATTAATGLGQNALSLTLGTTSAPSTTVNEGLGGIDFSSSSDKKSDKTGTRPEDS
KALKDENLPLLICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAAS
GLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHENSAPADYFRILVEQFEVQLQH
YRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKMLKDQYLG
YRKTFLGDAMDVFVARRAEAKKWQSAPRVITGPTPFSNIPNAAAVAMAATLSQQQQPATG
PQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGSSSAFGSTATGAPSFGFGTTNKPSG
SLSAGFGSSTTSGFNFSNPGITASAGLTFGVSNPASTGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggattctccttcggggccggcacgctgggctccgcggccgccgccgctgct
ggggcgggaggcggcggcgggggaggcttctccttcggagccgtccagccgagctcaact
ggagggcttaattttggaaccttgggtgcctcgactgctgcagcaactacatcagctcca
tcagtgggctttggaagtggactctttggttcaaaatctaccactgggcttgctctagga
ggtactaatacaggaacagctacaactattgctacaggattaacactgggagctcctgcc
gctacatcagcctctaccacaggttttagtttagggttcaacaaacctgcaggatcggcc
acaccatttgctttgcctattacttctacctcagcaggtggcctctcactttcttctgct
cttacatcaactcctgcagcaggttctactggctttacattaaatttgggtgggacaact
gccccaactacaagtgcatccacaggcctttcactgggaggagccttagctggtttggga
ggtacactcttccagaatgcaaccacagcagcaacaggactcggacagaatgctctgagt
ttgactctggggacgacttctgctccttcaactactgttaatgaaggccttggtggcata
gattttagtagctcttcagataaaaagagtgataaaacaggaacaagaccagaagatagt
aaagcactgaaggatgaaaatctacctctactaatctgtcaagatgtagaaaatctccag
aaatttgtgaaagaacaaaaacaagtgcaggaagaaattagtagaatgtcttccaaagca
atgcttaaagtacaggaggatattaaagctttgaaacagcttttgtcagtggctgctagt
ggactacagagaaacactcttaatattgacaaattgaaaatggaaactgcccaggagctg
aagaatgcagaaatagcattaagaacacagaaaactcctcctggtcttcaacatgaaaat
tcagccccagcagactacttcaggatcttggttgaacagtttgaagtacagctgcagcac
tacagacagcaaattgaagaactcgaaaatcatcttgccactcaagcaaacaattcacat
ataactccacaagatttgtctatggctatgcagaaaatttatcaaacatttgtagctcta
gctgcacaacttcaatcaatacatgaaaatgtaaagatgctcaaagaccaataccttggc
tatagaaaaacctttctgggagatgctatggatgtgtttgtggcaagacgagcagaagct
aagaaatggcagagtgccccacgtgttattactggaccaacccctttcagcaacatacca
aatgcagcagccgttgccatggctgccacactttctcagcagcaacagcctgctacaggg
ccacagccatctctgggagttagttttggaacgccattcggctcaggtattggcactggc
ttgcaatcaagtggcttaggttcttcaaaccttggaggatttggaagtagctctgctttt
ggaagcactgccacaggcgcaccatcgttcggatttggaactacaaataaaccctcagga
agtcttagtgcaggctttggcagctcaactacatctgggtttaacttcagtaatcctggc
atcacagcatcggctggcttgacatttggggtgtctaatcctgcatctacaggttttggg
acaggagggcaacttcttcagctgaagaaaccaccagctggaaacaagagagggaaaaga
tag
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