Trachemys scripta elegans (red-eared slider): 117871102
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Entry
117871102 CDS
T07347
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117871102 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117871102 (SPATA13)
Membrane trafficking [BR:
tst04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117871102 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
DUF5560
Motif
Other DBs
NCBI-GeneID:
117871102
NCBI-ProteinID:
XP_034614629
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All DBs
Position
1:304252995..304367682
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AA seq
1269 aa
AA seq
DB search
MTTFQNGCGNGTTVTCIVMDNKEPRSITSNGGCNSNNSAEEKIQDDHLSPSKIMRFFSTP
RKRTTSNSERPRSLIVMGSSSTWNALSSIRKMGSFKKLKSSVLQGIQARESSDVLNENTV
GKHVSNGAVVRVQTNRYSYSGPLHDSHNAVDGLASDCSDVEESDDSFLRNTHRSRSIRRA
YGVGRINLLDTDKIQSQQNCTRPTSPITQEPKICEILVKDPENNRIIYRRSKSTDSLNFL
KKSSFKRKSTSNLTDLKIASEKQVPQRTGSTSSADSDKASGNPERRSKRWKSPIRAKDFD
RVLKLVSNVTDVAWKKDGPKSTMTPLNEQNQRTRPNSRLHDDYSRRVSSSNENDRRRCIS
PVCSPDSTFSGTPHLHSPTVSQDTDTETNVFTGETNSFRTLSCVLDDVCSSHAFNDFSAL
PNEVFYEDSDEPKSTSQFTCESEQPSIPLRPTAPKPQSPSAEKVKCNINFHCPDRHSTLS
LSSMESEERVELPAPKLGRNPVCLQDSVQTGYYDDGNEDSGISSHSQLSLNLASGTEEKK
EEVVIDDQWRMSPSQDEERTDAQKFTPRRWGSGKRSRPRPLSDYGQLASRSLSIPEDSVA
VESQKTDCVDGESQPGLASVESMAQISTVGLQRGRKQRPISVIGGVSFYGSSQTEEIEDL
LTQPITRPPVPAHQVPPYKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNVVTDGGTES
SALVDDNGSEEDYSYEELCQPSPRYLQPGGEQLAINELISDGSMVYAEALWDHVTMDDQE
LGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELGENCGSIQDEEQHAD
ASKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTAAQLNTI
FGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSACLEL
SNLMKQSKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTEEHGDYN
NIQAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGQDVLARSSELIHSGELTKI
SKQGKSQQRIFFLFDHQLVFCKKDLLRRDMLYYKGRIDLDEMELVDIEDGKDKDFNINIK
NAFKTVNRATEEVHLFCAKKQEDKKRWLEACENERRRVQEDKEMGMEISENQKKQAMQNA
RKSRHGKIKGISYNGCPMPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPSLFWHT
FNKLTPFKK
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttcagaatggctgcggaaatggcaccactgttacctgtatagtaatggat
aataaagaaccaagaagtataactagcaatgggggatgcaatagcaacaacagtgctgaa
gagaaaatacaagatgaccatctcagcccttcaaaaatcatgcgctttttctctacccct
aggaaacgaactacttccaactcggaaaggcctcgttctctgattgtgatgggcagctct
tcaacgtggaatgctttgtcttccattagaaaaatgggatctttcaagaaattaaaatct
tcagttcttcaaggaattcaggccagagaaagctcagatgtcttaaatgagaacactgtg
ggaaaacatgtctcgaatggtgcagtggtgagagttcagactaaccggtattcttattca
gggcctttacatgattcccataatgcagtggatggtttggcttctgattgctctgatgta
gaggaaagtgatgattccttcctgaggaatactcaccgatcacgcagtatcagacgcgcc
tatggtgttggccgcatcaatttattagacacagataaaattcagagtcagcagaactgc
acgaggccaacgtctcccatcacccaggagccaaagatctgtgaaattttagtgaaagat
cctgaaaacaacaggattatctacagaagaagcaaaagcacagatagcttaaactttctg
aaaaagagctcgttcaaacgaaagtccacctcaaatctcactgacctcaagattgcaagt
gaaaagcaagtgccacaaaggacaggaagcacttcctctgctgactccgacaaagccagt
ggaaacccagagagacggtcaaaacgctggaagagccctatcagagcaaaggattttgac
agagttttgaaacttgtaagcaatgttacagatgttgcatggaagaaagatggtcctaag
agcacgatgactcctctgaatgaacaaaaccagagaacaaggccaaacagcagactacat
gacgactactcccgcagggtttctagtagcaatgaaaatgacagacggaggtgcatttcc
cctgtgtgcagtccagattctaccttttctggaacgccacatcttcatagtccaactgtt
tctcaggatacagacactgaaacaaatgtatttactggtgagaccaacagcttcagaaca
ttatcatgtgtcttagatgatgtctgttcctcacacgcttttaacgactttagtgcactt
cctaatgaagtgttttatgaagactctgatgaaccaaaaagtaccagccagtttacgtgt
gagtctgagcagcctagcattcctcttaggcccacagcccctaaacctcagagccccagt
gctgagaaggtcaagtgcaatattaatttccattgcccggatcgtcacagtacactgtca
ctgagctcaatggaaagcgaggaaagagttgagttacctgctccgaagttggggagaaat
cctgtttgcctccaggactcagtgcaaactgggtactatgatgatggaaatgaagacagt
ggcataagcagccactctcagctgagcctcaatttagcttctggtaccgaagaaaagaag
gaagaggttgttattgatgaccagtggaggatgtccccatcccaggatgaagaaaggaca
gatgcacaaaagttcactcccagaagatggggctctggaaaaagatctcggccaaggcca
ctctcagactatggtcagttggcaagcaggagtctctcaataccagaagattcagttgca
gtagagtctcagaaaacagactgtgtagatggtgaaagtcagcctggattggcttctgtg
gagtctatggctcaaatcagtacagtaggcctccaaagagggcgaaaacaaagacccatc
tctgtaataggtggggtcagtttctatgggagcagccaaacagaagaaatagaagatctg
ctgacacaaccaataacacggccacctgttccagcccaccaagttcccccatataaagct
gtttcagccaggttccggcccttcaccttttcacaaagcacccccattggcctggatcga
gtgggacggaggcggcaaatgagagcatctaatgttgttacagatggtggaactgaatct
tctgccttagttgatgacaatggtagtgaggaggattacagttatgaggagctctgccaa
cccagccctagatacctgcagcctggaggggaacagctagcaattaatgagctgataagt
gatggcagcatggtctatgcagaggcactgtgggaccacgtgactatggatgatcaagag
ctaggctttaaagctggggatgtcatcagagtccttgaagcttccaacaaagactggtgg
tggggaagaaatgaagacaaggaagcctggtttccagctagctttgtcaggctacgagtt
aatcaggaagaacttggagaaaattgtggtagcatccaggatgaagagcaacatgcagat
gctagcaaacatcgccaaaaaattgctgaaaacaaggatcagatgagaaccaatgtgata
caagaaataatgaacacggagagagtctatatcaaacatctcaaggacatctgtgaggga
tatattcggcagtgtcgtaaacatacaggaatgttcaccgcggctcagttaaacaccatt
tttggaaacattgaagatatttacaaattccaaagaaagtttctgaaagatcttgagaaa
cagtacaacaaagaggaacctcatttaagtgaaataggatcctgctttcttcaacatcaa
gaaggttttgccatctactcagagtattgtaacaatcatcccagtgcctgccttgagctt
tccaacctaatgaaacagagcaaataccgtcacttctttgaggcctgtcgcctgcttcag
cagatgattgacattgctattgatggctttctccttacacctgttcagaagatctgtaaa
taccctcttcagcttgcagagttactcaaatatactaccgaagagcatggtgattataac
aatatacaggcagcgtatgaggccatgaagaatgtagcatgcctcatcaatgagcgcaaa
cgaaggttggaaagcatagacaagattgcacgctggcaagtatctattgttgattgggag
gggcaggatgttttagccagaagctcagaactgatccactcgggcgaactgaccaaaatc
tcaaagcaaggcaaaagccagcagaggattttttttctttttgaccatcagcttgtgttc
tgtaagaaggacctgctgcgacgggacatgttatattacaaaggtcggattgatctggat
gagatggaacttgtggacattgaggatggcaaagataaggactttaacattaatatcaag
aatgctttcaaaactgtgaatagagcaacagaagaggttcatttgttttgtgcaaaaaaa
caggaagataagaaaaggtggctggaggcatgtgaaaatgaaaggcgaagagtgcaggaa
gacaaagaaatgggaatggaaatatcagaaaatcaaaagaaacaagccatgcaaaatgcg
agaaaatcaaggcatggaaaaattaaaggtataagttataatggatgtcccatgcctcct
ccacaccagagtttacatcctattcatcaacgccacatcactgtccccaccagcattcca
cagcagcaggtctttgccctggcagaacccaaacgaaagccatcccttttctggcacacc
ttcaacaaacttaccccattcaagaaatga
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integrated database retrieval system
