Trachemys scripta elegans (red-eared slider): 117871142
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Entry
117871142 CDS
T07347
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117871142 (ZC3H12C)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117871142 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
117871142
NCBI-ProteinID:
XP_034614714
LinkDB
All DBs
Position
1:complement(308742957..308799805)
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AA seq
889 aa
AA seq
DB search
MLFVFKLKMEYGTLYIQEYRKNSKVESSTCSSFMGLKDHLGHDLGHLYVERTDTQINAVG
SWSMVEKPTMDKVNSRKEDADKEASEETGSSSCDSEESTNSDNESERLNNITAESHLLPK
THRQLCRSPCLQPHVRKRNKILQDLKIEEAQIVSKEVKKPLDVVKEYQTKLEFALKLGYS
EEQVQLVLNKLGTDALINDILGELVKLGNKTETDQPVNNVNTNIMREASSIESQRSESPF
QEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERRHKDVTVFVPAWRK
EQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSND
NYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQ
PCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRALSRSTAAKAASEGGLVKSNSVPCST
KIDGTSDLKRAAPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPNSSVVKPQS
TAPLSNGLPSGVHFPPQDQRPQGQYPPMMMATKNHGTPMPYEQYPKCESPVDVGYYSMLN
AYSNLSISGPRSPERRFSLDTDYRISSVASDCSSEGSMSCGSNDSYVGYNDRSYMSSPDP
QLEENLKCQHVHPHSRLNSQPFLQSYHDPLTRVQSYSHEEPKHHRKPPTPYMSVHLQHPT
VGARSSCPNDYSALQSLQHSKTMHLGRALVSTRIDSISDSRLYDNSPLRQRKPYSSQDGL
GSWDRQSYGIDAYGYRQTYSLPSNPTQPCYEQFAFQSLPEQQDQTWCIPYCGIPQDPPRY
QDTREKVYINLCNIFPPDLVRIVMKRNPHMTDAQQLAAAILVEKSQLGY
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgctctttgttttcaaattaaaaatggaatacgggacactttatattcaggaatacagg
aaaaacagcaaagtggaatcgagtacatgcagcagcttcatgggcttgaaggatcatctg
gggcatgacctaggccatctttatgtggagcgcactgacacacaaataaatgcagttgga
tcttggtcaatggtggagaaaccaacaatggataaagttaactctaggaaggaagatgca
gataaggaggcatctgaggagactggaagctccagttgtgattcagaagagagcacaaat
tctgataacgagtcagagagactgaataacattacagcagaatcacatctgctacctaag
actcaccgacaactgtgcaggtctccctgcttacagcctcatgtacgaaaacgtaacaaa
atcttacaagaccttaagatagaggaggcccagatagtatctaaggaagtaaagaagccc
cttgatgtggtgaaggaatatcaaaccaaactggagtttgcacttaagttaggttactct
gaagaacaggttcaacttgtgctaaataagcttggcactgatgctttaatcaatgatatt
ttgggagaacttgtcaaacttggaaataaaactgagactgaccagcctgtaaataatgtt
aacactaacataatgcgtgaagcatcttccatagagtctcagaggtctgagtctccattt
caggaggatgtgactgaagatggagataacctgaggccaatagttattgatggcagcaat
gtggcaatgagccatgggaacaaagaagtattttcttgtagaggaataaaattggcagta
gactggtttttggaaagacgccacaaagatgttacagtgtttgtgccagcatggagaaaa
gaacagtcaagacctgacgctcttatcacagatcaagaaatcctgcgcaagttagaaaaa
gagaaaattctggtgtttacaccatcccgtcgtgtgcaggggagaagggtggtatgctat
gatgacagattcatagtgaagctggcctttgagtcagatggtatcattgtgtctaatgat
aactacagggatctagctaatgaaaagccagaatggaaaaagttcatagatgagcgattg
ttgatgtattcatttgtcaatgacaagttcatgcctcctgatgatcctcttggccgtcat
ggcccaagccttgacaattttctaaggaagaaacctattgtaccggaacataagaagcaa
ccatgtccatatggaaagaaatgtacctatggacacaaatgcaaatactaccacccagaa
agaggaaatcagcctcagcggtctgttgctgatgaacttcgagccctgtctagaagcaca
gctgccaaagctgcaagtgaaggaggactggtaaaaagcaacagtgttccttgtagcact
aagattgatggcacttctgatctcaaacgtgctgctccaaagaggcaatcagatcctagt
ataaggactcaagtctaccaagacttggaggaaaagcttcccaccaaaaacaaattggaa
accaggtctgttccttctttagttagtataccgaattcttcagttgtaaaaccccaaagt
actgcacctttaagcaatggccttccatccggggttcatttcccacctcaggatcaaaga
ccacagggacaatatcctccaatgatgatggcaaccaaaaatcatggaacgccaatgcct
tatgagcagtacccaaaatgtgagtctcctgtggacgtaggctactactctatgctgaat
gcttattcgaatctaagtatttctggtccacgcagtcctgaaaggcgtttctccttagac
accgattataggattagctctgtagcttctgattgtagcagtgaaggtagtatgagctgt
ggtagtaacgattcctatgtgggttacaatgatcggtcttacatgagttcacctgacccg
caattagaagagaacttaaaatgccaacatgtgcatccacatagccgccttaattcacag
cccttcctgcagagttaccatgatcctttaacaagagtgcaaagttacagtcatgaagaa
ccaaagcatcatcgcaaacctcctactccatacatgtctgtacatctacagcatcctaca
gttggtgctcgttctagttgccctaatgactactctgctcttcaaagtttgcaacattca
aagaccatgcatctggggagggcccttgtatccacaagaatagatagcatttcagactca
cgtttatatgataattctccattaagacaaagaaagccttattccagccaagatgggctt
ggaagttgggataggcagagttatgggattgatgcgtacggctatcgtcagacttactcc
ttgcctagtaaccccactcagccatgttacgagcagttcgccttccaaagtttacctgag
cagcaagaccagacttggtgcataccttactgtggaattcctcaagatcctccaaggtat
caagacacacgggagaaggtttatataaacttatgcaacatcttccctcccgatcttgtg
agaattgttatgaaaaggaatcctcacatgacagatgctcagcaacttgctgcagccatt
ttagtggaaaaatcccagctaggttattga
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