KEGG   Trachemys scripta elegans (red-eared slider): 117871152
Entry
117871152         CDS       T07347                                 
Symbol
CUL5
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117871152 (CUL5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tst04121]
    117871152 (CUL5)
   03400 DNA repair and recombination proteins [BR:tst03400]
    117871152 (CUL5)
Ubiquitin system [BR:tst04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     117871152 (CUL5)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117871152 (CUL5)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 TFC3_eWH
Other DBs
NCBI-GeneID: 117871152
NCBI-ProteinID: XP_034614730
LinkDB
Position
1:complement(309959184..310034629)
AA seq 780 aa
MATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKE
EEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLM
DKVPNGIEPMLKDLEEHIVSAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP
LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDF
TEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatctcttaaagaataaaggttcacttcagtttgaagacaaatgggat
ttcatgcgccccattgttctgaagctgttacgccaggaatctgtcacaaaacagcagtgg
tttgatctgttttcggatgtgcatgcagtttgcttgtgggatgacaaaggtccagcaaaa
attcatcaagctttgaaagaagacatccttgattttattaaacaagcacaggcaagagta
ctgagtcatcaagatgatacagctttactaaaagcatacatagtagaatggcgcaaattc
tttacacagtgtgatatcttgcccaaaccattttgtcaactagaaattactttaatgggt
aagcagggcagcaacaagaaatccaatgtagaagacagtattgttcgaaagctcatgcta
gatacttggaatgagtccatattttcaaatataaagaatcgacttcaggacagtgcaatg
aagctggttcatgccgaaagactaggagaagcttttgactctcaacttgttattggagtt
agagaatcatatgttaacctttgttctaatcctgaagataaacttcagatttatcgggat
aactttgagaaggcatatttggattcaacagagagattttatagaacacaagccccttct
tatttacaacaaaatggagtacagaattatatgaaatatgcagacgctaaattaaaggaa
gaagagaaaagagcattaaggtatctagagacaaggcgcgaatgtaactctgtagaagcg
cttatggagtgctgtgtgaatgctctggtgacctcatttaaagaaactattttagctgaa
tgccaaggcatgatcaaacgaaatgaaacggaaaagttgcatctaatgttttcactgatg
gataaagttcctaatggaatagagcccatgttaaaagacttggaagagcatattgttagt
gctggactagcagatatggtagcagctgctgaaactattactactgattctgagaaatat
gtagagcagttgcttacattatttaatcgatttagtaagctggttaaagaagcttttcaa
gatgacccaaggtttcttactgcaagagataaggcatataaggcagttgtgaatgatgct
acaatatttaaacttgaattgccattgaagcagaaaggggttggattgaaaacacagcct
gagtccaaatgccctgaactgcttgctaattactgtgacatgctgttaagaaaaacacca
ctaagcaaaaaattaacctctgaagaaattgaagcaaagcttaaggaagtgcttttggta
cttaaatatgtacagaataaggatgttttcatgcgataccacaaagctcacttaacaaga
cgtctgatactagatatatcagctgatagtgaaattgaagagaatatggtggaatggctg
agagaagtaggtatgccagcagactatgtaaacaagttggccaggatgttccaggatatc
aaagtatctgaagacttgaaccaggccttcaaagaaatgcacaaaaataataagttggcc
ctaccagctgattctgtgaatattaaaattttaaatgctggtgcctggtctcgaagttcc
gaaaaagtgtttgtatcgctacccacggaattagaagacctcatcccagaggtagaagag
ttctacaaaaagaatcacagtggcagaaaactgcactggcatcatctcatgtccaatgga
attataacatttaagaatgaggttggccagtatgacttagaggtaacaacgtttcagctg
gctgtgctgtttgcatggaaccaaagacccagagagaaaatcagctttgaaaatcttaaa
ctggcaactgagctccctgatgcagaacttaggaggactttatggtctcttgtagcattt
ccaaagctgaaacgtcaggttttattgtatgaacctcaagtcaattcgcccaaagacttt
acagaaggaactctcttctccgtgaaccaggagttcagtttaataaaaaatgctaaagtt
cagaaaaggggtaagataaacttgattggccggttgcaactcactacagaaagaatgcga
gaagaggagaatgaaggaattgtccaactaagaatattacgaacccaggaggctattatc
caaataatgaaaatgcggaagaaaattactaatgctcagcttcagactgaactggtagaa
atattgaaaaacatgttcttgccacaaaagaaaatgataaaagagcaaattgaatggctt
atagagcacaaatatatcagaagagatgaatcggatatcaacaccttcatatacatggca
taa

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