Trachemys scripta elegans (red-eared slider): 117871175
Help
Entry
117871175 CDS
T07347
Name
(RefSeq) matrix metalloproteinase-27-like
KO
K08005
matrix metalloproteinase-27 [EC:3.4.24.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117871175
Peptidases and inhibitors [BR:
tst01002
]
Metallo peptidases
Family M10
117871175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Astacin
Metallopep
Reprolysin_4
Reprolysin_5
DUF4953
Peptidase_M54
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
117871175
NCBI-ProteinID:
XP_034614772
LinkDB
All DBs
Position
1:313748244..313757404
Genome browser
AA seq
470 aa
AA seq
DB search
MRIRMKSLPFLLLLYVAFSYAFPVLPEKNNEGKNMQLVQEYLEKFYELQPDPEHLAWRRS
TSPMVEKIQKMQEFFGLEVTGKPDPETLEVMQKPRCGVPDVGQYGFILPGWKKNKLTYRI
VNYTPDMTQTDVDKAIQKAFKVWSTVSPLTFTRIYKGIADIMIAFGTGAHGRCPRYFDGP
LGVLGHAFPPGNGIGGDVHFDEDEHWTEGSAGFNLFLVAAHEFGHALGLSHSTDRGALMF
PNYAYINPTEFLLSPDDINGIQAIYGPSPNTPDEPARPTSPKTCDPMVSFDAITTLRREV
MFFKDRHIWRVYPGNSEVELELISTFWPFLPSGIQAAYENIKDQILFFKGNNFWVISGYQ
VLPGYPKNINTLGFPRSVKKIDAAVSNKNTGKTDFFVGDKYWRYEESSQSMEKGYPRQIT
DDFPGIGKNVDAVFQHKGFFYFFHGSKQWEFDPNAKRVIRVMTSNSWFNC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaggataagaatgaagagccttccatttttgctgttactatatgtagcattttcttat
gcttttcctgtacttccagaaaaaaacaatgaaggaaaaaatatgcagcttgtacaggag
tatctagagaaattttatgagcttcaaccagatccggagcatctagcatggagaaggagc
actagccccatggttgaaaaaatccaaaaaatgcaagaattttttgggttggaagtgacc
gggaagccagatccagagactttggaagtgatgcagaagcccagatgtggagttcctgat
gtcggacagtatggtttcattctcccaggatggaaaaaaaacaaactgacatacagaatt
gtgaattacactccagatatgacacaaactgatgtggataaagcaatccagaaggcattt
aaagtatggagcactgtgtccccactgactttcactaggatttataaagggatagcagac
ataatgattgcttttgggactggagctcatggtcgctgtccccgttattttgatggaccc
cttggtgttcttggccatgcctttccacctggcaatggtattggaggagatgtccacttt
gatgaagatgaacactggacagaaggctctgctgggttcaacttgtttctggttgctgct
catgagtttggccacgcattgggtctctcacattccactgaccgtggagctttgatgttc
ccaaattatgcctacatcaaccccactgaattcctgctttccccagatgacattaatggt
atacaggccatttacggaccctcacctaacaccccggatgagccagccagacccacatca
cctaaaacctgtgatcctatggtgtctttcgatgccatcaccacactgcgcagagaagtc
atgttttttaaagacaggcacatatggcgagtttatcctggtaattcagaagttgaactt
gaattaatttctacgttctggccttttctgccatctggtattcaagctgcttatgaaaat
attaaagatcagattctatttttcaaagggaataatttctgggttatcagtgggtaccag
gtgctccctggttatcctaagaacatcaacacgttgggtttcccaaggagtgttaagaaa
attgatgcagctgtttctaataaaaacacaggaaaaacagacttttttgtaggtgacaag
tattggaggtatgaggaaagcagtcaatccatggaaaaaggctatccaagacagataaca
gatgactttccaggaattggcaagaatgttgatgctgttttccagcataaaggattcttc
tactttttccatggatcaaagcaatgggagtttgaccctaacgctaagagagttattcgt
gtgatgacgagcaatagctggtttaactgttaa
DBGET
integrated database retrieval system
