Trachemys scripta elegans (red-eared slider): 117871219
Help
Entry
117871219 CDS
T07347
Symbol
TAF1D
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit D
KO
K15215
TATA box-binding protein-associated factor RNA polymerase I subunit D
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117871219 (TAF1D)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117871219 (TAF1D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1D
Motif
Other DBs
NCBI-GeneID:
117871219
NCBI-ProteinID:
XP_034614851
LinkDB
All DBs
Position
1:319423995..319452252
Genome browser
AA seq
366 aa
AA seq
DB search
MTDTDEAKTSAFDHFEDSQDLIYTLQEQSNVHEHVAARSSCLGSAQKDSVCEKSSQESYI
SGRSSKYFTYLTTTVPTNALLDDSGSEIDLSDSTSSLIQHECNITPAARSSTRHLANSPA
NTLDRDTSSDSSLDPGSPFKLAKSPGLSRSALNLKASFDYHLRRKYRRQAHQRCKEKPKE
RKKRYKSTGKPRGRPRLTAPQEEQKKRLLDRGFQFSFVEKEYGKKHIPMKMIFEYEQAAL
KGYFQYIKMLKYEEHLKKALKNLNASEDLENECMAMRKHKYIDDEGPISPIEETDGDDHN
LDPDQEELGATIVENSCFILSSKLPSKKKSKTKAKHAKLIREDEMEEEHAADGPGPVQEI
LHRSEN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgactgatactgatgaagccaagacttcagcttttgaccactttgaagattcccaagat
ctaatatatacgctgcaagaacagtctaatgtgcatgaacatgtagctgcaaggagttca
tgtttaggctctgcacagaaagattctgtatgtgaaaaatcttcacaggaatcctacatc
agtggtagatcttccaaatatttcacctacttgaccaccactgttccaaccaatgctctg
ctggatgacagcggttcagagattgacctttctgattctactagcagcttgatccaacac
gagtgtaacattacaccggcagctcgaagttcaacaaggcacttggcaaactctccagca
aatacattagacagagacacttcatctgactcctctctggaccctgggtctccatttaag
ttggctaaatccccagggctgtctagatccgcactcaatttgaaagccagttttgactat
cacttgaggaggaagtataggagacaagcacatcaaagatgtaaggagaaaccaaaagag
agaaaaaagaggtacaagagcacaggaaaacctagagggagaccgcggctaactgctcca
caagaagagcagaaaaaaagacttctagacagaggttttcagttttcttttgtggaaaaa
gaatatggaaagaaacatatccccatgaaaatgatttttgaatatgagcaagcagcttta
aaaggatatttccaatacattaagatgctcaaatatgaagaacatctcaaaaaggcttta
aaaaacctgaatgctagtgaggatttagaaaatgaatgtatggcgatgcggaaacacaaa
tacatagatgacgaaggacccatttctcctatcgaggagacagatggagatgaccacaac
ttggatcctgatcaagaagaacttggtgccacaatagttgagaacagctgtttcatatta
agcagcaaacttccaagcaagaaaaaatcaaagacaaaagcaaagcatgcaaaactgatc
agggaagatgaaatggaggaagaacatgctgctgatgggcctgggcctgtacaggagata
ctacacagatcagaaaactag
DBGET
integrated database retrieval system
